RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 CDC42EP4Q9H3Q1 356 aaKnown RBP3.87□□□□□ -1.79
SGCE-210ENST00000472326 RBKSQ9H477 322 aa3.87□□□□□ -1.79
SGCE-210ENST00000472326 CLCF1Q9UBD9 225 aa3.87□□□□□ -1.79
SGCE-210ENST00000472326 SLC25A15Q9Y619 301 aa3.87□□□□□ -1.79
SGCE-210ENST00000472326 CEP164Q9UPV0 1460 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 IGLV4-60A0A075B6I1 120 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 RGS16O15492 202 aaPredicted RBP3.86□□□□□ -1.79
SGCE-210ENST00000472326 TDGF1P13385 188 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 ZNF823P16415 610 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 ATP6V1C1P21283 382 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 HNRNPA2B1P22626 353 aaKnown RBP3.86□□□□□ -1.79
SGCE-210ENST00000472326 CD86P42081 329 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 ARRB1P49407 418 aaPredicted RBP3.86□□□□□ -1.79
SGCE-210ENST00000472326 GPM6AP51674 278 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 TDGF1P3P51864 188 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 BPIFB3P59826 476 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 TATDN3Q17R31 274 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 DEFB116Q30KQ4 102 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 LRRC10Q5BKY1 277 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 MARCH8Q5T0T0 291 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 SLC22A8Q8TCC7 542 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 FOPNLQ96NB1 174 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 RAB18Q9NP72 206 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 SEC14L3Q9UDX4 400 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 PCSK1NQ9UHG2 260 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 LAMP5Q9UJQ1 280 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 MEMO1Q9Y316 297 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 HEBP2Q9Y5Z4 205 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 CHD1O14646 1710 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 ADGRL1O94910 1474 aa3.86□□□□□ -1.79
SGCE-210ENST00000472326 BAZ1BQ9UIG0 1483 aaKnown RBP3.86□□□□□ -1.79
SGCE-210ENST00000472326 KIR2DL5BA0A0G2JN68 375 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 KIR2DL5BA0A0G2JPC4 375 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 SS18L1O75177 396 aaPredicted RBP3.85□□□□□ -1.79
SGCE-210ENST00000472326 IMPDH1P20839 514 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 PCMT1P22061 227 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 MAP3K8P41279 467 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 GSSP48637 474 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 RGS4P49798 205 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 C1orf61Q13536 156 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 KIAA0087Q14695 138 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 MICBQ29980 383 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 RSPO1Q2MKA7 263 aaPredicted RBP3.85□□□□□ -1.79
SGCE-210ENST00000472326 OR52E8Q6IFG1 317 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 PGAP1Q75T13 922 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 CCDC65Q8IXS2 484 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 KIR2DL5AQ8N109 375 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 OR4D5Q8NGN0 318 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 ITCHQ96J02 903 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 SRMSQ9H3Y6 488 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 RPL36Q9Y3U8 105 aaKnown RBP3.85□□□□□ -1.79
SGCE-210ENST00000472326 KIF3AQ9Y496 699 aa3.85□□□□□ -1.79
SGCE-210ENST00000472326 KDM6BO15054 1643 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 ADCY5O95622 1261 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 PNMTP11086 282 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 KRT13P13646 458 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 ABOP16442 354 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 CARD16Q5EG05 197 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 BEND3Q5T5X7 828 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 HSDL2Q6YN16 418 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 ABHD12BQ7Z5M8 362 aaPredicted RBP3.84□□□□□ -1.79
SGCE-210ENST00000472326 C12orf56Q8IXR9 622 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 SECISBP2Q96T21 854 aaKnown RBP3.84□□□□□ -1.79
SGCE-210ENST00000472326 CTRCQ99895 268 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 TMEM246Q9BRR3 403 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 TUBGCP2Q9BSJ2 902 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 DEFB127Q9H1M4 99 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 ZFP14Q9HCL3 533 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 PALMDQ9NP74 551 aa3.84□□□□□ -1.79
SGCE-210ENST00000472326 FARSBQ9NSD9 589 aaKnown RBP3.84□□□□□ -1.79
SGCE-210ENST00000472326 THUMPD1Q9NXG2 353 aaKnown RBP3.84□□□□□ -1.79
SGCE-210ENST00000472326 AIREO43918 545 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 SPAG7O75391 227 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 SUPT3HO75486 399 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 POU2F1P14859 743 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 HMGB2P26583 209 aaKnown RBP3.83□□□□□ -1.8
SGCE-210ENST00000472326 SLC26A3P40879 764 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 CXCL5P42830 114 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 MNAT1P51948 309 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 ZNF136P52737 540 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 SNTB2Q13425 540 aaKnown RBP3.83□□□□□ -1.8
SGCE-210ENST00000472326 RFX4Q33E94 735 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 LINC00483Q53H64 154 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 RIPPLY2Q5TAB7 128 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 ZNF695Q8IW36 515 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 CYB561D1Q8N8Q1 229 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 SYT14Q8NB59 555 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 CCDC54Q8NEL0 328 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 ZNF721Q8TF20 911 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 TAAR1Q96RJ0 339 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 RNF2Q99496 336 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 RTBDNQ9BSG5 229 aaPredicted RBP3.83□□□□□ -1.8
SGCE-210ENST00000472326 GPR61Q9BZJ8 451 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 REEP4Q9H6H4 257 aa3.83□□□□□ -1.8
SGCE-210ENST00000472326 KIF13AQ9H1H9 1805 aa3.82□□□□□ -1.8
SGCE-210ENST00000472326 SLIT3O75094 1523 aa3.82□□□□□ -1.8
SGCE-210ENST00000472326 ZNF608Q9ULD9 1512 aaPredicted RBP3.82□□□□□ -1.8
SGCE-210ENST00000472326 LOC110117498-PIK3R3F6TDL0 507 aa3.82□□□□□ -1.8
SGCE-210ENST00000472326 FOXH1O75593 365 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms