RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 OR2Y1Q8NGV0 311 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 OR4K13Q8NH42 304 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 OR8K3Q8NH51 312 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 MOSPD2Q8NHP6 518 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 HGDQ93099 445 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 MOGAT1Q96PD6 335 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 EXOSC4Q9NPD3 245 aaKnown RBP13.16□□□□□ -0.3
HDAC6-213ENST00000462730 NDUFB11Q9NX14 153 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 SEC14L4Q9UDX3 406 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 KLHL21Q9UJP4 597 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 ADAM18Q9Y3Q7 739 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 PCDHGB6Q9Y5F9 930 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 EXPH5Q8NEV8 1989 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 LOC102723996A0A087X1L8 192 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 CCDC187A0A096LP49 1063 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 SLC22A31A6NKX4 558 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 C9orf172C9J069 976 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 ADAM10O14672 748 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 CDC40O60508 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
HDAC6-213ENST00000462730 ZFAND5O76080 213 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 TSPAN19P0C672 248 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 CLUP10909 449 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 HIST1H1CP16403 213 aaKnown RBP13.16□□□□□ -0.3
HDAC6-213ENST00000462730 CPEP16870 476 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 SLC2A5P22732 501 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 ETV6P41212 452 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 PCOLCEQ15113 449 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 QPRTQ15274 297 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF791Q3KP31 576 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-213ENST00000462730 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 KLHL36Q8N4N3 616 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 TMEM99Q8N816 258 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 DUSP19Q8WTR2 217 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 KTI12Q96EK9 354 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-213ENST00000462730 LRFN3Q9BTN0 628 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 SIAEQ9HAT2 523 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 MMP25Q9NPA2 562 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 NANSQ9NR45 359 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 ERVK13-1Q9NX77 482 aa13.16□□□□□ -0.3
HDAC6-213ENST00000462730 CAB39Q9Y376 341 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-213ENST00000462730 J3QRE1 110 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 AQP2P41181 271 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 FOLR3P41439 243 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 CASP3P42574 277 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 PRPS1P60891 318 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 ERVK-25P63136 954 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 LTBQ06643 244 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 EIF3IQ13347 325 aaKnown RBP13.15□□□□□ -0.3
HDAC6-213ENST00000462730 SPANXN2Q5MJ10 180 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 STPG1Q5TH74 334 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 C6orf15Q6UXA7 325 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-213ENST00000462730 CCBE1Q6UXH8 406 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-213ENST00000462730 TIPARPQ7Z3E1 657 aaKnown RBP13.15□□□□□ -0.3
HDAC6-213ENST00000462730 MISPQ8IVT2 679 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 SLC7A5P1Q8MH63 180 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 GPR119Q8TDV5 335 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 LIPHQ8WWY8 451 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 TM9SF4Q92544 642 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 TMCO6Q96DC7 493 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 PRRX2Q99811 253 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 JAM3Q9BX67 310 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 KLHL1Q9NR64 748 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 TAS2R10Q9NYW0 307 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 FOXJ2Q9P0K8 574 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 FBXL4Q9UKA2 621 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 STUB1Q9UNE7 303 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 HS3ST3B1Q9Y662 390 aa13.15□□□□□ -0.3
HDAC6-213ENST00000462730 IGHV1-45A0A0A0MS14 117 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 PNMA8CA0A1B0GUJ8 204 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 FAM172BPA6NC97 362 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 C12orf71A8MTZ7 269 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 BLOC1S5-TXNDC5H3BN57 136 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 SNX4O95219 450 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 GYPBP06028 91 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 MRPL3P09001 348 aaKnown RBP13.14□□□□□ -0.31
HDAC6-213ENST00000462730 COX6A1P12074 109 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 PSMA1P25786 263 aaKnown RBP13.14□□□□□ -0.31
HDAC6-213ENST00000462730 SOX6P35712 828 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 POLR2HP52434 150 aaKnown RBP13.14□□□□□ -0.31
HDAC6-213ENST00000462730 DEFA1P59665 94 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 DEFA3P59666 94 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 SF3B4Q15427 424 aaKnown RBP eCLIP13.14□□□□□ -0.318e-7■■■■□ 21.6
HDAC6-213ENST00000462730 COL28A1Q2UY09 1125 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 GDPD3Q7L5L3 318 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF485Q8NCK3 441 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 DEFB124Q8NES8 71 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 UFD1Q92890 307 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 GPX7Q96SL4 187 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-213ENST00000462730 TBX5Q99593 518 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 TEAD3Q99594 435 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 ARHGAP9Q9BRR9 750 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF649Q9BS31 505 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 KATNB1Q9BVA0 655 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 DEFB126Q9BYW3 111 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 TPK1Q9H3S4 243 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 PADI1Q9ULC6 663 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 HIF3AQ9Y2N7 669 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms