RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 OR5AP2Q8NGF4 316 aa4.15□□□□□ -1.74
DEPDC1-202ENST00000456315 UBTD2Q8WUN7 234 aa4.15□□□□□ -1.74
DEPDC1-202ENST00000456315 FATE1Q969F0 183 aa4.15□□□□□ -1.74
DEPDC1-202ENST00000456315 YPEL4Q96NS1 127 aa4.15□□□□□ -1.74
DEPDC1-202ENST00000456315 NRIP2Q9BQI9 281 aa4.15□□□□□ -1.74
DEPDC1-202ENST00000456315 SFXN1Q9H9B4 322 aa4.15□□□□□ -1.74
DEPDC1-202ENST00000456315 ASB6Q9NWX5 421 aa4.15□□□□□ -1.74
DEPDC1-202ENST00000456315 HCFC2Q9Y5Z7 792 aa4.15□□□□□ -1.74
DEPDC1-202ENST00000456315 FAM171A2A8MVW0 826 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 MAN2B1O00754 1011 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 STC2O76061 302 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ATP1B1P05026 303 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 SERPINA5P05154 406 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 HMGN2P05204 90 aaKnown RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 SBK2P0C263 348 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 PVALBP20472 110 aaPredicted RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ACRV1P26436 265 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 APLNRP35414 380 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 TSFMP43897 325 aaKnown RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 HTR5AP47898 357 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 GATMP50440 423 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ILF3Q12906 894 aaKnown RBP eCLIP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 HSPB3Q12988 150 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 MRPL28Q13084 256 aaKnown RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 SNTB1Q13884 538 aaKnown RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 LASP1Q14847 261 aaKnown RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ANGPT1Q15389 498 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 TP53I3Q53FA7 332 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 DCST1Q5T197 706 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 LRRN1Q6UXK5 716 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 CD300LDQ6UXZ3 194 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 GDPD4Q6W3E5 623 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 MACC1Q6ZN28 852 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF574Q6ZN55 896 aaPredicted RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF620Q6ZNG0 422 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 NRMQ8IXM6 262 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 CARNMT1Q8N4J0 409 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ZSCAN4Q8NAM6 433 aaPredicted RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 OR51A7Q8NH64 312 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 FAM174AQ8TBP5 190 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 SGK3Q96BR1 496 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF251Q9BRH9 671 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ALG8Q9BVK2 526 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 RIOK2Q9BVS4 552 aaKnown RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 DPAGT1Q9H3H5 408 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 TUBA4BQ9H853 241 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM161AQ9NX61 479 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 MAPRE3Q9UPY8 281 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A1W2PRB8 838 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 CDHR4A6H8M9 788 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 RNF13O43567 381 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 CLDN11O75508 207 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 NDUFB6O95139 128 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 HTR3BO95264 441 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 RAB36O95755 333 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 PAX1P15863 534 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 DCAF7P61962 342 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 COX10Q12887 443 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 RAB33AQ14088 237 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 SWI5Q1ZZU3 235 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF658BQ4V348 819 aaPredicted RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 NCEH1Q6PIU2 408 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 RAB11FIP2Q7L804 512 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 PDZD9Q8IXQ8 264 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 ACBD7Q8N6N7 88 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 OR4S1Q8NGB4 309 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 WFIKKN2Q8TEU8 576 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 C16orf78Q8WTQ4 265 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 PPP1R1CQ8WVI7 109 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 FCRL4Q96PJ5 515 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 CST11Q9H112 138 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 UNKLQ9H9P5 680 aaKnown RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 NOX4Q9NPH5 578 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 NMRK2Q9NPI5 230 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC39A1Q9NY26 324 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 TREM2Q9NZC2 230 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 NFKBIL1Q9UBC1 381 aaPredicted RBP4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 MLXQ9UH92 298 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 IL36AQ9UHA7 158 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 AMDHD2Q9Y303 409 aa4.15□□□□□ -1.75
DEPDC1-202ENST00000456315 DISC1C4P0D8 188 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 TSPAN6O43657 245 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 FCGR3AP08637 254 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 ITGA5P08648 1049 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 ANXA5P08758 320 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 HMGA1P17096 107 aaKnown RBP4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 RCC1P18754 421 aaPredicted RBP4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 CDK2P24941 298 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 MAT2AP31153 395 aaKnown RBP4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 NKX2-1P43699 371 aaPredicted RBP4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 P2RX1P51575 399 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 CLDN17P56750 224 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 ECH1Q13011 328 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 CAMK1Q14012 370 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 SURF2Q15527 256 aaPredicted RBP4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 MOGAT2Q3SYC2 334 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 CLEC9AQ6UXN8 241 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF546Q86UE3 836 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 FAM24BQ8N5W8 94 aa4.14□□□□□ -1.75
DEPDC1-202ENST00000456315 PXT1Q8NFP0 134 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms