RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CORINQ9Y5Q5 1042 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 LOC102725191A0A1B0GVB3 256 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 M0R082 166 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 SIAH2O43255 324 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 PRSS23O95084 383 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 IGF2P01344 180 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 PPP3CBP16298 524 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 CRYGSP22914 178 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 GRPRP30550 384 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 OR1E2P47887 323 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 P2RY6Q15077 328 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 EXOC3L2Q2M3D2 409 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 SPATS1Q496A3 300 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 SAMD4BQ5PRF9 694 aaKnown RBP12.53□□□□□ -0.4
HDAC4-205ENST00000454542 C16orf89Q6UX73 402 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 DEF8Q6ZN54 512 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 C22orf34Q6ZV56 151 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 VTCN1Q7Z7D3 282 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 P3H2Q8IVL5 708 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 ZNF417Q8TAU3 575 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 LZICQ8WZA0 190 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 APH1AQ96BI3 265 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 ZNF775Q96BV0 537 aaPredicted RBP12.53□□□□□ -0.4
HDAC4-205ENST00000454542 HSH2DQ96JZ2 352 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 PRRC1Q96M27 445 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 WFIKKN1Q96NZ8 548 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 MOGAT1Q96PD6 335 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 ZNF385AQ96PM9 386 aaKnown RBP12.53□□□□□ -0.4
HDAC4-205ENST00000454542 ZNF587Q96SQ5 575 aaPredicted RBP12.53□□□□□ -0.4
HDAC4-205ENST00000454542 RASSF1Q9NS23 344 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 NDRG3Q9UGV2 375 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 SLC7A7Q9UM01 511 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 B3GALT5Q9Y2C3 310 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 PDZD2O15018 2839 aa12.53□□□□□ -0.4
HDAC4-205ENST00000454542 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.4
HDAC4-205ENST00000454542 DEFB108AA8MXU0 73 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 TRAF3IP2O43734 574 aaPredicted RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 MT-ATP6P00846 226 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 SERPINA1P01009 418 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 HRGP04196 525 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 THBDP07204 575 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 T-ENOLP0DO92 83 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 NCK1P16333 377 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 CALB2P22676 271 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 LOXP28300 417 aaPredicted RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 GTF2E2P29084 291 aaKnown RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 RBM34P42696 430 aaKnown RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 MNAT1P51948 309 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 ZNF74Q16587 644 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 IFI44LQ53G44 452 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 SFRP5Q5T4F7 317 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 FBXW9Q5XUX1 488 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 SEZ6L2Q6UXD5 910 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 CASP12Q6UXS9 341 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 NHLRC1Q6VVB1 395 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 CREB3L2Q70SY1 520 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 TSEN54Q7Z6J9 526 aaKnown RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 CXorf67Q86X51 503 aaPredicted RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 EPHX4Q8IUS5 362 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 OFCC1Q8IZS5 231 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 RBM15BQ8NDT2 890 aaKnown RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 TPD52L3Q96J77 140 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 AMBRA1Q9C0C7 1298 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 KLHL4Q9C0H6 718 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 ACTR6Q9GZN1 396 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 GORASP2Q9H8Y8 452 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 FKRPQ9H9S5 495 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 MRPL39Q9NYK5 338 aaKnown RBP12.52□□□□□ -0.41
HDAC4-205ENST00000454542 ADA2Q9NZK5 511 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 EGFL7Q9UHF1 273 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 MAGEL2Q9UJ55 1249 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 RCE1Q9Y256 329 aa12.52□□□□□ -0.41
HDAC4-205ENST00000454542 NOTCH2Q04721 2471 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 LRBAP50851 2863 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 GSTA4O15217 222 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 MRPL33O75394 65 aaKnown RBP12.51□□□□□ -0.41
HDAC4-205ENST00000454542 ADAP00813 363 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 SEMG1P04279 462 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 IFNW1P05000 195 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 PTNP21246 168 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 IGHV1-2P23083 117 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 UGT2B15P54855 530 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 TAS2R41P59536 307 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 ITGADQ13349 1161 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 PIN1Q13526 163 aaPredicted RBP12.51□□□□□ -0.41
HDAC4-205ENST00000454542 GLYATQ6IB77 296 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 SLC46A3Q7Z3Q1 461 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 NKAIN4Q8IVV8 208 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 ZNF100Q8IYN0 542 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 DEFB107AQ8IZN7 70 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 FAM156AQ8NDB6 213 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 STEAP2Q8NFT2 490 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 BCAS4Q8TDM0 211 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 FAM162AQ96A26 154 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 SLC25A36Q96CQ1 311 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms