RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 EXOC3L4Q17RC7 722 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 WSCD2Q2TBF2 565 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 TCP11X2Q5H9J9 407 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 MS4A13Q5J8X5 152 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 BRMS1LQ5PSV4 323 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 DCAF12Q5T6F0 453 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 C1orf146Q5VVC0 180 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 TPGS2Q68CL5 300 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 IYDQ6PHW0 289 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ARSKQ6UWY0 536 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PLEKHG7Q6ZR37 379 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 SETD3Q86TU7 594 aaPredicted RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 BBS7Q8IWZ6 715 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 GPR65Q8IYL9 337 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 FNDC5Q8NAU1 212 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 OR4M2Q8NGB6 313 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 OR52N1Q8NH53 320 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 GRPEL2Q8TAA5 225 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ZNF420Q8TAQ5 688 aaPredicted RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 MGARPQ8TDB4 240 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 MCOLN3Q8TDD5 553 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 KCTD4Q8WVF5 259 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PTP4A1Q93096 173 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 YIPF5Q969M3 257 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 NCLNQ969V3 563 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 RAB7BQ96AH8 199 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 DCPSQ96C86 337 aaKnown RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 SLC25A38Q96DW6 304 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 FMO2Q99518 471 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 TMEM246Q9BRR3 403 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 INPP5KQ9BT40 448 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 DCUN1D5Q9BTE7 237 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 KIFC1Q9BW19 673 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 IDI2Q9BXS1 227 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 STMN4Q9H169 189 aaPredicted RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 ST6GALNAC4Q9H4F1 302 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 LY9Q9HBG7 655 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 CRLF2Q9HC73 371 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ZDHHC4Q9NPG8 344 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ACOXLQ9NUZ1 547 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PARVAQ9NVD7 372 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 MAT2BQ9NZL9 334 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 TMOD2Q9NZR1 351 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 HMG20BQ9P0W2 317 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 LGALS13Q9UHV8 139 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 SNX24Q9Y343 169 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PRELID3BQ9Y3B1 194 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 DENND4AQ7Z401 1863 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 BCORQ6W2J9 1755 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 C3P01024 1663 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ADAMTSL3P82987 1691 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 USP54Q70EL1 1684 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ALKQ9UM73 1620 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 TRPM2O94759 1503 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 ADAMTS13Q76LX8 1427 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 RTL9Q8NET4 1388 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 KIDINS220Q9ULH0 1771 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 MN1Q10571 1320 aaPredicted RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 MROH5Q6ZUA9 1318 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 RAB19A4D1S5 217 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 LRRIQ4A6NIV6 560 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CLDN25C9JDP6 229 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 F8W036 122 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 H0YJX3 145 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 NUPL2O15504 423 aaKnown RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SYT7O43581 403 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 BUB1O43683 1085 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 BCAS1O75363 584 aaPredicted RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 GPX5O75715 221 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PALMO75781 387 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CIB2O75838 187 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 RBBP9O75884 186 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CLPXO76031 633 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SLITRK3O94933 977 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SEMA3DO95025 777 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SNX4O95219 450 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 H6PDO95479 791 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SNAP29O95721 258 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 APOC1P02654 83 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 FGGP02679 453 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 IFNA16P05015 189 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CALB1P05937 261 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 POLR2MP0CAP2 368 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 UBTFL1P0CB47 393 aaPredicted RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CT45A10P0DMU9 189 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SPNP16150 400 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 IMPDH1P20839 514 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 NMT1P30419 496 aaKnown RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SOX6P35712 828 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 DDOSTP39656 456 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 HTR2BP41595 481 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 GRIA1P42261 906 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 MAGEA1P43355 309 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 MAGEA4P43358 317 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 ATP5OP48047 213 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 GDI2P50395 445 aaKnown RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SLC18A1P54219 525 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 AIF1P55008 147 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CCNA1P78396 465 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 ROR1Q01973 937 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms