RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 LRRC40Q9H9A6 602 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 MMP26Q9NRE1 261 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 HOXC10Q9NYD6 342 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 KCNIP1Q9NZI2 227 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 IGHV1OR21-1A0A087WYE8 117 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 GJE1A6NN92 205 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 GFYI3L273 518 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 AGPAT2O15120 278 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 CXCR2P25025 360 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 IL12AP29459 219 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 FMO3P31513 532 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 CTRLP40313 264 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 PTGDSP41222 190 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 MAP3K8P41279 467 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 VDAC2P45880 294 aaPredicted RBP2.29□□□□□ -2.04
LINC00397-201ENST00000422074 KLK7P49862 253 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 NRF1Q16656 503 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 IMMTQ16891 758 aaKnown RBP2.29□□□□□ -2.04
LINC00397-201ENST00000422074 KLHL38Q2WGJ6 581 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 BOLA3Q53S33 107 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 SFT2D3Q587I9 215 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 OR52E8Q6IFG1 317 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 CASC1Q6TDU7 716 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 PGAP1Q75T13 922 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 ECHDC2Q86YB7 292 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 TBC1D21Q8IYX1 336 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 OR2L13Q8N349 312 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 ZNF786Q8N393 782 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 FNDC5Q8NAU1 212 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 C20orf203Q8NBC4 194 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 MFSD9Q8NBP5 474 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 CATSPER1Q8NEC5 780 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 OR52M1Q8NGK5 317 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 NEIL3Q8TAT5 605 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 CHCHD10Q8WYQ3 142 aaPredicted RBP2.29□□□□□ -2.04
LINC00397-201ENST00000422074 CMTM7Q96FZ5 175 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 SLC38A2Q96QD8 506 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 KCNA7Q96RP8 456 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 RASL11BQ9BPW5 248 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 MRPL45Q9BRJ2 306 aaKnown RBP2.29□□□□□ -2.04
LINC00397-201ENST00000422074 RTBDNQ9BSG5 229 aaPredicted RBP2.29□□□□□ -2.04
LINC00397-201ENST00000422074 CAPS2Q9BXY5 557 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 SMOXQ9NWM0 555 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 SMPD3Q9NY59 655 aaPredicted RBP2.29□□□□□ -2.04
LINC00397-201ENST00000422074 SEC14L3Q9UDX4 400 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 MTRF1LQ9UGC7 380 aaKnown RBP2.29□□□□□ -2.04
LINC00397-201ENST00000422074 POLDIP2Q9Y2S7 368 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 PRG3Q9Y2Y8 225 aaPredicted RBP2.29□□□□□ -2.04
LINC00397-201ENST00000422074 N6AMT1Q9Y5N5 214 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 CACNG2Q9Y698 323 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 WSB1Q9Y6I7 421 aa2.29□□□□□ -2.04
LINC00397-201ENST00000422074 ATP10AO60312 1499 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 ATAD2BQ9ULI0 1458 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 IGKV2D-24A0A075B6R9 120 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 IGKV1D-8A0A087WSZ0 117 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 NSG1A0A0A6YYJ2 146 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 CLRN2A0PK11 232 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 PSMB11A5LHX3 300 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 LOC110117498-PIK3R3F6TDL0 507 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 TOM1O60784 492 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 ZNF324O75467 553 aaPredicted RBP2.28□□□□□ -2.04
LINC00397-201ENST00000422074 IL1BP01584 269 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 IGHG4P01861 327 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 HPGDP15428 266 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 NCK1P16333 377 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 PCMT1P22061 227 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 SLC2A5P22732 501 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 MAGEA8P43361 318 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 GSSP48637 474 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 CSNK1DP48730 415 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 CCT3P49368 545 aaKnown RBP2.28□□□□□ -2.04
LINC00397-201ENST00000422074 CASP4P49662 377 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 SH3BGRP55822 239 aaPredicted RBP2.28□□□□□ -2.04
LINC00397-201ENST00000422074 ACTR1AP61163 376 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 PLD1Q13393 1074 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 GPM6BQ13491 265 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 GRB7Q14451 532 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 C16orf72Q14CZ0 275 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 SHHQ15465 462 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 ATP6AP1Q15904 470 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 DUSP7Q16829 419 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 BCL7AQ4VC05 210 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 C1orf100Q5SVJ3 147 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 PDZK1Q5T2W1 519 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 EFL1Q7Z2Z2 1120 aaKnown RBP2.28□□□□□ -2.04
LINC00397-201ENST00000422074 PLA2G4DQ86XP0 818 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 RDH10Q8IZV5 341 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 ARIH2OSQ8N7S6 290 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 ACOT4Q8N9L9 421 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 EIF1ADQ8N9N8 165 aaKnown RBP2.28□□□□□ -2.04
LINC00397-201ENST00000422074 SUMF2Q8NBJ7 301 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 BHLHE23Q8NDY6 225 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 CCDC54Q8NEL0 328 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 OR10G3Q8NGC4 313 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 OR6C4Q8NGE1 309 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 OR9G1Q8NH87 305 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 BLOC1S5Q8TDH9 187 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 SCFD1Q8WVM8 642 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 UFD1Q92890 307 aa2.28□□□□□ -2.04
LINC00397-201ENST00000422074 RPUSD4Q96CM3 377 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms