RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 ITGA3P26006 1051 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 ATP6V1E1P36543 226 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 OPN5Q6U736 354 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 SHFQ7M4L6 423 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 OR4F15Q8NGB8 312 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 ZNF563Q8TA94 476 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 DACH2Q96NX9 599 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 TNFRSF10DQ9UBN6 386 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 HRH3Q9Y5N1 445 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 CHCHD2Q9Y6H1 151 aaPredicted RBP18.2■□□□□ 0.5
RUFY3-203ENST00000417478 PMF1-BGLAPU3KQ54 211 aa18.2■□□□□ 0.5
RUFY3-203ENST00000417478 SLC22A31A6NKX4 558 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 NOS3P29474 1203 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 KLRF1Q9NZS2 232 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 TLX3O43711 291 aaPredicted RBP18.19■□□□□ 0.5
RUFY3-203ENST00000417478 F10P00742 488 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 CPEP16870 476 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 MST1P26927 711 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 OPRL1P41146 370 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 PTGDSP41222 190 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 AIMP2Q13155 320 aaKnown RBP18.19■□□□□ 0.5
RUFY3-203ENST00000417478 ITGADQ13349 1161 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 ZNF362Q5T0B9 420 aaPredicted RBP18.19■□□□□ 0.5
RUFY3-203ENST00000417478 PHC2Q8IXK0 858 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 BEST3Q8N1M1 668 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 CLEC1AQ8NC01 280 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 SLC37A3Q8NCC5 494 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 RNF138Q8WVD3 245 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 LIPHQ8WWY8 451 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 FER1L6-AS2Q96M78 137 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 ADAM19Q9H013 955 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 METTL7AQ9H8H3 244 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 CCDC59Q9P031 241 aaKnown RBP18.19■□□□□ 0.5
RUFY3-203ENST00000417478 STUB1Q9UNE7 303 aa18.19■□□□□ 0.5
RUFY3-203ENST00000417478 J3QRE1 110 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 GPX5O75715 221 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 SOWAHCQ53LP3 525 aaPredicted RBP18.18■□□□□ 0.5
RUFY3-203ENST00000417478 OR2G6Q5TZ20 316 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 PRAMEF20Q5VT98 475 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 DPY19L2P2Q6ZN68 376 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 S100ZQ8WXG8 99 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 PTP4A1Q93096 173 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 MED20Q9H944 212 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 CHRNA9Q9UGM1 479 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 KLHL21Q9UJP4 597 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 A3GALT2U3KPV4 340 aa18.18■□□□□ 0.5
RUFY3-203ENST00000417478 TSPAN19P0C672 248 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 CASP3P42574 277 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 PRPS1P60891 318 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 RPS3AP61247 264 aaKnown RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 RPS4XP62701 263 aaKnown RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 CRMP1Q14194 572 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 INPP5JQ15735 1006 aaPredicted RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 TOMM34Q15785 309 aaPredicted RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 JMJD6Q6NYC1 403 aaPredicted RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 MDGA2Q7Z553 956 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 KLHL36Q8N4N3 616 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 LRRC17Q8N6Y2 441 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 ZNF485Q8NCK3 441 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 OR6Q1Q8NGQ2 317 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 OR52N1Q8NH53 320 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 ERMAPQ96PL5 475 aaPredicted RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 SECISBP2Q96T21 854 aaKnown RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 ARHGAP9Q9BRR9 750 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 HCAR1Q9BXC0 346 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 HMG20AQ9NP66 347 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 PALMDQ9NP74 551 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 ERVK13-1Q9NX77 482 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 SPIN1Q9Y657 262 aaPredicted RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 IGF2RP11717 2491 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 A6NL46 340 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 CLDN25C9JDP6 229 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 EFSO43281 561 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 CCL3P10147 92 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 PGCP20142 388 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 ITPKBP27987 946 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 TPBGQ13641 420 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 ZNF846Q147U1 533 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 ZNF404Q494X3 552 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 LIPKQ5VXJ0 399 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 LHFPL3Q86UP9 236 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 OR51G2Q8NGK0 314 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 OR5W2Q8NH69 310 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 MCFD2Q8NI22 146 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 GATAD2BQ8WXI9 593 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 KISS1RQ969F8 398 aaPredicted RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 WDR12Q9GZL7 423 aaKnown RBP18.17■□□□□ 0.5
RUFY3-203ENST00000417478 MMP27Q9H306 513 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 RNF167Q9H6Y7 350 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 HPF1Q9NWY4 346 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 STMN3Q9NZ72 180 aa18.17■□□□□ 0.5
RUFY3-203ENST00000417478 METTL15A6NJ78 407 aa18.16■□□□□ 0.5
RUFY3-203ENST00000417478 LRRN3E7EW58 273 aa18.16■□□□□ 0.5
RUFY3-203ENST00000417478 TP53I11O14683 189 aa18.16■□□□□ 0.5
RUFY3-203ENST00000417478 KLK10O43240 276 aa18.16■□□□□ 0.5
RUFY3-203ENST00000417478 CDC40O60508 579 aaKnown RBP eCLIP18.16■□□□□ 0.5
RUFY3-203ENST00000417478 WISP1O95388 367 aa18.16■□□□□ 0.5
RUFY3-203ENST00000417478 TACR3P29371 465 aa18.16■□□□□ 0.5
RUFY3-203ENST00000417478 CRYBB2P43320 205 aa18.16■□□□□ 0.5
RUFY3-203ENST00000417478 CBFBQ13951 182 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms