RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TMEM163Q8TC26 289 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 GRHL3Q8TE85 626 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 EXTL1Q92935 676 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 UTP23Q9BRU9 249 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 RTN4RQ9BZR6 473 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 PROK2Q9HC23 129 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 HPF1Q9NWY4 346 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 NDUFB11Q9NX14 153 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 ANKRD10Q9NXR5 420 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 PLA2G3Q9NZ20 509 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 ABI3Q9P2A4 366 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 TESQ9UGI8 421 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 ZNF443Q9Y2A4 671 aaPredicted RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 OR5H15A6NDH6 313 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 ALG1L2C9J202 215 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 AP3D1O14617 1153 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 TP53I11O14683 189 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 MYL12BO14950 172 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PRODHO43272 600 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 NTN1O95631 604 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 RAB36O95755 333 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 F10P00742 488 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 DBIP07108 87 aaKnown RBP9.04□□□□□ -0.96
DDB1-202ENST00000414411 ADH7P40394 386 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PTGDSP41222 190 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 CASP3P42574 277 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 CD97P48960 835 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 GAS1P54826 345 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 ZNF45Q02386 682 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 SNAPC1Q16533 368 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 LINC00303Q3SY05 128 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PDZK1Q5T2W1 519 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 FNDC7Q5VTL7 733 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 SPINK14Q6IE38 97 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PAQR6Q6TCH4 344 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 RTL4Q6ZR62 310 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PLEKHM3Q6ZWE6 761 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PRICKLE2Q7Z3G6 844 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PEX5LQ8IYB4 626 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 ARL6IP6Q8N6S5 226 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 MDS2Q8NDY4 140 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PIGXQ8TBF5 258 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 ACOT11Q8WXI4 607 aaPredicted RBP9.04□□□□□ -0.96
DDB1-202ENST00000414411 TMCO6Q96DC7 493 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 FAM46AQ96IP4 442 aaKnown RBP9.04□□□□□ -0.96
DDB1-202ENST00000414411 SIGLEC12Q96PQ1 595 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 NEURL2Q9BR09 285 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 POLR2J2Q9GZM3 115 aaKnown RBP9.04□□□□□ -0.96
DDB1-202ENST00000414411 MRPS18AQ9NVS2 196 aaKnown RBP9.04□□□□□ -0.96
DDB1-202ENST00000414411 CNIH4Q9P003 139 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 LRFN1Q9P244 771 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 SEC14L4Q9UDX3 406 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 PEX16Q9Y5Y5 336 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 ATRXP46100 2492 aa9.04□□□□□ -0.96
DDB1-202ENST00000414411 A0A1W2PQD3 144 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 ISPDA4D126 451 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 OR5F1O95221 314 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 PDGFAP04085 211 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 THY1P04216 161 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 THBS1P07996 1170 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 CCL3P10147 92 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 NID1P14543 1247 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 FPR3P25089 353 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 PSMA1P25786 263 aaKnown RBP9.03□□□□□ -0.96
DDB1-202ENST00000414411 EVI2BP34910 448 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 ETV6P41212 452 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 CRYBB2P43320 205 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 HOXC5Q00444 222 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 PLAURQ03405 335 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 SNTA1Q13424 505 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 OR1C1Q15619 314 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 ZNF181Q2M3W8 571 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 SLC22A10Q63ZE4 541 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 BICRALQ6AI39 1079 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 ZNF836Q6ZNA1 936 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 LYSMD2Q8IV50 215 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 NKAIN4Q8IVV8 208 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 OR8H2Q8N162 312 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 PARP16Q8N5Y8 322 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 PSD4Q8NDX1 1056 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 ABHD17AQ96GS6 310 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 CNTNAP3BQ96NU0 1288 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 SLC38A2Q96QD8 506 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 MCHR1Q99705 422 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 ANGPTL4Q9BY76 406 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 CNTNAP3Q9BZ76 1288 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 PRRG3Q9BZD7 231 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 STUB1Q9UNE7 303 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 NTNG1Q9Y2I2 539 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 UGT2A1Q9Y4X1 527 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 SPTA1P02549 2419 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 CACNA1BQ00975 2339 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 A0A075B6Q4 140 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 IRGMA1A4Y4 181 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 CDHR4A6H8M9 788 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 SERINC4A6NH21 518 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 KDM4EB2RXH2 506 aaPredicted RBP9.03□□□□□ -0.96
DDB1-202ENST00000414411 MKRN2OSH3BPM6 223 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 K7EM74 188 aa9.03□□□□□ -0.96
DDB1-202ENST00000414411 TBX1O43435 398 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms