RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ACSS1Q9NUB1 689 aaPredicted RBP10.24□□□□□ -0.77
CUX1-204ENST00000393824 PLCL2Q9UPR0 1127 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 CEP192Q8TEP8 1941 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 PLXND1Q9Y4D7 1925 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 RAB19A4D1S5 217 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 A6NCN8 305 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 ZNF749O43361 778 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 MST1P26927 711 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 HOXA6P31267 233 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 PCBP4P57723 403 aaKnown RBP10.24□□□□□ -0.77
CUX1-204ENST00000393824 MAT1AQ00266 395 aaKnown RBP10.24□□□□□ -0.77
CUX1-204ENST00000393824 LPAL2Q16609 132 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 TMEM255AQ5JRV8 349 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 CXXC5Q7LFL8 322 aaKnown RBP10.24□□□□□ -0.77
CUX1-204ENST00000393824 PRSS45Q7RTY3 260 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 KRT78Q8N1N4 520 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 EID2Q8N6I1 236 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 DTWD2Q8NBA8 298 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 OR6T1Q8NGN1 323 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 OR4Q3Q8NH05 313 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 BBS10Q8TAM1 723 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 DNASE2BQ8WZ79 361 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 OSTF1Q92882 214 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 LRRC61Q9BV99 259 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 MFRPQ9BY79 579 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 DUSP15Q9H1R2 295 aaPredicted RBP10.24□□□□□ -0.77
CUX1-204ENST00000393824 OPN4Q9UHM6 478 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 ARID1BQ8NFD5 2236 aaPredicted RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 ZNF318Q5VUA4 2279 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 FANCMQ8IYD8 2048 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 TRAV1-2A0A0B4J238 106 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 PRAMEF27A3QJZ7 478 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 SAP18O00422 153 aaKnown RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 ARPC1BO15143 372 aaKnown RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 GATBO75879 557 aaKnown RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 EPPINO95925 133 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 PPP2R1BP30154 601 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 AP3S2P59780 193 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 MC2RQ01718 297 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 MAPK14Q16539 360 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 ZNF528Q3MIS6 628 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 PRRT3Q5FWE3 981 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 CLEC12AQ5QGZ9 265 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 SLC25A25Q6KCM7 469 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 TMEM17Q86X19 198 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 OR4D9Q8NGE8 314 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 WDR89Q96FK6 387 aaPredicted RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 ARL5BQ96KC2 179 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 ALG8Q9BVK2 526 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 OR51I1Q9H343 314 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 XKR8Q9H6D3 395 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 GAREM1Q9H706 876 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 AUNIPQ9H7T9 357 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 NOX3Q9HBY0 568 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 SIRT3Q9NTG7 399 aaPredicted RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 H2AFY2Q9P0M6 372 aaPredicted RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 RCE1Q9Y256 329 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 EP300Q09472 2414 aaPredicted RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 ASXL3Q9C0F0 2248 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 TNFRSF10CO14798 259 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 B4GALT2O60909 372 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 SIX6O95475 246 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 IFNA4P05014 189 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 SLC35G4P0C7Q5 338 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 EPXP11678 715 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 ATF1P18846 271 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 TBXA2RP21731 343 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 DHPSP49366 369 aaPredicted RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 GDI2P50395 445 aaKnown RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 ANXA11P50995 505 aaKnown RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 DLX5P56178 289 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 RELQ04864 619 aaPredicted RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 PRAMEF8Q5VWM4 474 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 PRAMEF7Q5VXH5 474 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 PARGQ86W56 976 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 LINC01555Q8NAE3 123 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 BBS1Q8NFJ9 593 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 OR1M1Q8NGA1 313 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 TM4SF18Q96CE8 201 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 FCRL4Q96PJ5 515 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 RHBGQ9H310 441 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 BARX1Q9HBU1 254 aaPredicted RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 ZNF69Q9UC07 566 aa10.23□□□□□ -0.77
CUX1-204ENST00000393824 MRTO4Q9UKD2 239 aaKnown RBP10.23□□□□□ -0.77
CUX1-204ENST00000393824 A0A1B0GVT2 93 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 ANKRD61A6NGH8 418 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 PATE3B3GLJ2 98 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 PRAMEF2O60811 474 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 STX11O75558 287 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 CDC123O75794 336 aaPredicted RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 ATG12O94817 140 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 CH25HO95992 272 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 SNRPBP14678 240 aaKnown RBP10.22□□□□□ -0.77
CUX1-204ENST00000393824 PSMB5P28074 263 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 MPGP29372 298 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 AVPR2P30518 371 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 STAT5AP42229 794 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 OMPP47874 163 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 ERVK-25P63136 954 aa10.22□□□□□ -0.77
CUX1-204ENST00000393824 COL9A2Q14055 689 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms