RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 DUSP7Q16829 419 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 SLC25A25Q6KCM7 469 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 MDGA2Q7Z553 956 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 VANGL1Q8TAA9 524 aaPredicted RBP18.63■□□□□ 0.57
SYNC-201ENST00000373484 SFXN5Q8TD22 340 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 HOXB13Q92826 284 aaPredicted RBP18.63■□□□□ 0.57
SYNC-201ENST00000373484 SGCZQ96LD1 299 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 ZNF607Q96SK3 696 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 SOSTQ9BQB4 213 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 KLHL1Q9NR64 748 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 ZCCHC3Q9NUD5 404 aaKnown RBP18.63■□□□□ 0.57
SYNC-201ENST00000373484 CLEC2DQ9UHP7 191 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 A0A1W2PRQ8 180 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 AP3D1O14617 1153 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 NME2P1O60361 137 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 CDRT1O95170 752 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 NME2P22392 152 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 KCNJ5P48544 419 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 CCT3P49368 545 aaKnown RBP18.63■□□□□ 0.57
SYNC-201ENST00000373484 PRKAG1P54619 331 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 QPRTQ15274 297 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 NTRK2Q16620 822 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 LCN1P1Q5VSP4 162 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 PGBD2Q6P3X8 592 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 RTL4Q6ZR62 310 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 SZRD1Q7Z422 152 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 TMEM178AQ8NBL3 297 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 DUSP18Q8NEJ0 188 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 ANGPTL6Q8NI99 470 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 MOAP1Q96BY2 351 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 LMF2Q9BU23 707 aaKnown RBP18.63■□□□□ 0.57
SYNC-201ENST00000373484 ABCB9Q9NP78 766 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 ACOXLQ9NUZ1 547 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 DNAJC27Q9NZQ0 273 aa18.63■□□□□ 0.57
SYNC-201ENST00000373484 CFL1P23528 166 aaKnown RBP18.62■□□□□ 0.57
SYNC-201ENST00000373484 SDC2P34741 201 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 MAP3K8P41279 467 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 EFNB1P98172 346 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 MZT2BQ6NZ67 158 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 CD200R1LQ6Q8B3 271 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 GALNTL5Q7Z4T8 443 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 PRR22Q8IZ63 422 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 OR56A1Q8NGH5 318 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 ZFAND1Q8TCF1 268 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 TRMT61AQ96FX7 289 aaKnown RBP18.62■□□□□ 0.57
SYNC-201ENST00000373484 C11orf54Q9H0W9 315 aaPredicted RBP18.62■□□□□ 0.57
SYNC-201ENST00000373484 SH2D2AQ9NP31 389 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 EQTNQ9NQ60 294 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 PAQR5Q9NXK6 330 aaPredicted RBP18.62■□□□□ 0.57
SYNC-201ENST00000373484 GSTK1Q9Y2Q3 226 aa18.62■□□□□ 0.57
SYNC-201ENST00000373484 SHANK1Q9Y566 2161 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 A0A1W2PQL4 384 aaPredicted RBP18.61■□□□□ 0.57
SYNC-201ENST00000373484 TTLL8A6PVC2 850 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 OR10H3O60404 316 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 TMCC2O75069 709 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 NAGAP17050 411 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 PRKCAP17252 672 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 GSTM3P21266 225 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 SOAT1P35610 550 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 WNT4P56705 351 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 ARPC4P59998 168 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 RAB40BQ12829 278 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 ZNHIT3Q15649 155 aaPredicted RBP18.61■□□□□ 0.57
SYNC-201ENST00000373484 ZMAT1Q5H9K5 638 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 MFSD12Q6NUT3 480 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 WDR53Q7Z5U6 358 aaPredicted RBP18.61■□□□□ 0.57
SYNC-201ENST00000373484 CDRT4Q8N9R6 151 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 GPR32P1Q8NGA4 272 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 OR52I1Q8NGK6 324 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 SLC38A5Q8WUX1 472 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 NR4A3Q92570 626 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 DIRAS2Q96HU8 199 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 TIGARQ9NQ88 270 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 KLF13Q9Y2Y9 288 aaPredicted RBP18.61■□□□□ 0.57
SYNC-201ENST00000373484 EXOSC1Q9Y3B2 195 aaKnown RBP18.61■□□□□ 0.57
SYNC-201ENST00000373484 NINQ8N4C6 2090 aa18.61■□□□□ 0.57
SYNC-201ENST00000373484 CYP7B1O75881 506 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 MYL12AP19105 171 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 RAB25P57735 213 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 RIPPLY1Q0D2K3 151 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 PLCXD2Q0VAA5 305 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 TNK1Q13470 666 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 SPDYE7PQ495Y7 208 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 EXOSC6Q5RKV6 272 aaKnown RBP18.6■□□□□ 0.57
SYNC-201ENST00000373484 ZCCHC12Q6PEW1 402 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 ZNF730Q6ZMV8 503 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 PAQR8Q8TEZ7 354 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 OMA1Q96E52 524 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 ARHGEF9O43307 516 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 PPM1BO75688 479 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 TP53P04637 393 aaPredicted RBP18.6■□□□□ 0.57
SYNC-201ENST00000373484 HMGN2P05204 90 aaKnown RBP18.6■□□□□ 0.57
SYNC-201ENST00000373484 TSPAN19P0C672 248 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 FBXW4P57775 412 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 TMEM44Q2T9K0 475 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 ENTPD8Q5MY95 495 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 PRICKLE2Q7Z3G6 844 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 TCEANCQ8N8B7 351 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 OR10G3Q8NGC4 313 aa18.6■□□□□ 0.57
SYNC-201ENST00000373484 OR4N2Q8NGD1 307 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms