RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 IGHV1OR21-1A0A087WYE8 117 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 A0A1W2PQ09 198 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 FAM171A2A8MVW0 826 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TOX3O15405 576 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 EEF1E1O43324 174 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SCGNO76038 276 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 IGHG1P01857 330 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 F13BP05160 661 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 IGHV4-34P06331 123 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 STOMP27105 288 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TGFBR1P36897 503 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 E2F1Q01094 437 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 RIPPLY1Q0D2K3 151 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 EIF2B1Q14232 305 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 FGFBP1Q14512 234 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 RAB11BQ15907 218 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 GAB4Q2WGN9 574 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM244Q5VVB8 128 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 XAF1Q6GPH4 301 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 PHC2Q8IXK0 858 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 LNX2Q8N448 690 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 OR13C3Q8NGS6 347 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 OR5J2Q8NH18 312 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 OR8K3Q8NH51 312 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC25A43Q8WUT9 341 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 YIPF6Q96EC8 236 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 DNAJA3Q96EY1 480 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC41A2Q96JW4 573 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 DHRS1Q96LJ7 313 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TEAD3Q99594 435 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 MED20Q9H944 212 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 IL20Q9NYY1 176 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 COQ3Q9NZJ6 369 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SCP2D1Q9UJQ7 156 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 PADI1Q9ULC6 663 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF281Q9Y2X9 895 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 CHD5Q8TDI0 1954 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 HMX3A6NHT5 357 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 DNAJB6O75190 326 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 GLCEO94923 617 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 KDM4BO94953 1096 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 IFNA7P01567 189 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CSTBP04080 98 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SBK2P0C263 348 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 HOXB3P14651 431 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PRKACBP22694 351 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ITGA3P26006 1051 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SFTPDP35247 375 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 APOBEC1P41238 236 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SSR4P51571 173 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PLP2Q04941 152 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SNTB2Q13425 540 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 VWA2Q5GFL6 755 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 EEF1A1P5Q5VTE0 462 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 GPR137CQ8N3F9 429 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 DYNC2LI1Q8TCX1 351 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SFXN2Q96NB2 322 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NMNAT3Q96T66 252 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TTYH1Q9H313 450 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 FKRPQ9H9S5 495 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 RANGRFQ9HD47 186 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 HINT3Q9NQE9 182 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NDUFB11Q9NX14 153 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NLKQ9UBE8 527 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CLEC2DQ9UHP7 191 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NLRC5Q86WI3 1866 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PRAMEF25A6NGN4 478 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TVP23AA6NH52 213 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ACOT7O00154 380 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TNFRSF10AO00220 468 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SURF4O15260 269 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ITGA5P08648 1049 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CPEP16870 476 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 UQCRC1P31930 480 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 GALNSP34059 522 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 MAP2K6P52564 334 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 RPS25P62851 125 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 GALEQ14376 348 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CTF1Q16619 201 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 MPEG1Q2M385 716 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ZXDCQ2QGD7 858 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ARTNQ5T4W7 220 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 C1orf140Q5VVS0 124 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CARD17Q5XLA6 110 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 HBMQ6B0K9 141 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NIPAL3Q6P499 406 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TMPRSS11FQ6ZWK6 438 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 DGLUCYQ7Z3D6 616 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 BCDIN3DQ7Z5W3 292 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 MARCH3Q86UD3 253 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 IFI44Q8TCB0 444 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ST8SIA1Q92185 356 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TSLPQ969D9 159 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PGAM5Q96HS1 289 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 FUZQ9BT04 418 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 URM1Q9BTM9 101 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 WDR76Q9H967 626 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 FANCFQ9NPI8 374 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PISDQ9UG56 409 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms