RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PCDHAC1Q9H158 963 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 UQCC1Q9NVA1 299 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GPR160Q9UJ42 338 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PURGQ9UJV8 347 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 BCL2L11O43521 198 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CST4P01036 141 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 FDXRP22570 491 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HTR1FP30939 366 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 FAM160A2Q8N612 972 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 EXO1Q9UQ84 846 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SCGB1D1O95968 90 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GPX2P18283 190 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 RPL23AP62750 156 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM128Q5BJH2 165 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 IQCF1Q8N6M8 205 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR5D14Q8NGL3 314 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PGAM5Q96HS1 289 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 FXYD6-FXYD2A0A087WZ82 144 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SIGLEC5O15389 551 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 RPS25P62851 125 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CSTF1Q05048 431 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 EGR3Q06889 387 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SIGLEC14Q08ET2 396 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 LRRTM4Q86VH4 590 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TGIF2LYQ8IUE0 185 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 BEND2Q8NDZ0 799 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 IL22RA2Q969J5 263 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SMIM19Q96E16 107 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 FXYD6Q9H0Q3 95 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CARHSP1Q9Y2V2 147 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM184BQ9Y519 407 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 A0A0B4J293 547 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 KLRG2A4D1S0 409 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GSTP1P09211 210 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MC1RQ01726 317 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 REC114Q7Z4M0 266 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SUMF2Q8NBJ7 301 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR13C8Q8NGS7 320 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 RBP7Q96R05 134 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 KXD1Q9BQD3 176 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 UTP23Q9BRU9 249 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 THAP7Q9BT49 309 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 NAT8BQ9UHF3 227 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MCTS1Q9ULC4 181 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 C13orf42A0A1B0GVH6 325 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CXorf49A8MYA2 514 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 BNIP3Q12983 259 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLC5A12Q1EHB4 618 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GOLGA7BQ2TAP0 167 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR5D16Q8NGK9 328 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MITD1Q8WV92 249 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 NMRK2Q9NPI5 230 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 NENFQ9UMX5 172 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MYO5CQ9NQX4 1742 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HMX2A2RU54 273 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 RFPL4AA6NLU0 287 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 RFPL4AL1F8VTS6 287 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 B3GALT2O43825 422 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SRMP19623 302 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 FIGLAQ6QHK4 219 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GPR135Q8IZ08 494 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PNKDQ8N490 385 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ADAD1Q96M93 576 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 NMES1Q9C002 83 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MS4A7Q9GZW8 240 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLC35B3Q9H1N7 401 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MYH8P13535 1937 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 BMP5P22003 454 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLC6A11P48066 632 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 RXFP3Q9NSD7 469 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ABI3Q9P2A4 366 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 AURKAO14965 403 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GPR37L1O60883 481 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR6A2O95222 327 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CST2P09228 141 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLC25A6P12236 298 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR4D2P58180 307 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 LRRC32Q14392 662 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM185AQ8NFB2 350 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ANKK1Q8NFD2 765 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PP6455Q8WZ26 134 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 NINJ1Q92982 152 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SFRP2Q96HF1 295 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PSORS1C1Q9UIG5 152 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DNPH1O43598 174 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HBQ1P09105 142 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CSNK1A1P48729 337 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CEBPEQ15744 281 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PCGF3Q3KNV8 242 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PRAMEF14Q5SWL7 426 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 NRMQ8IXM6 262 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 UBAC2Q8NBM4 344 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR5A1Q8NGJ0 315 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SAMD10Q9BYL1 202 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 RBM22Q9NW64 420 aaKnown RBP eCLIP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OARD1Q9Y530 152 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ALKQ9UM73 1620 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 C1orf226A1L170 272 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF729A6NN14 1252 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PRKAG1P54619 331 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 256.6 ms