RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 C6orf132Q5T0Z8 1188 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CATSPERDQ86XM0 798 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 OR6V1Q8N148 313 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 FAM71E2Q8N5Q1 922 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SGPP1Q9BX95 441 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 IL17CQ9P0M4 197 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 TMEM181Q9P2C4 612 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CRHBPP24387 322 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 GABREP78334 506 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 TBC1D28Q2M2D7 210 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF791Q3KP31 576 aaPredicted RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 GPRIN1Q7Z2K8 1008 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 KATNB1Q9BVA0 655 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 RIMS4Q9H426 269 aaPredicted RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 LRIT1Q9P2V4 623 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 RASD1Q9Y272 281 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 PCDHGA7Q9Y5G6 932 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 TMEM189-UBE2V1I3L0A0 370 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 SLC16A7O60669 478 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 CARD18P57730 90 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 GPLD1P80108 840 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 MOGSQ13724 837 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 SNTB1Q13884 538 aaKnown RBP9.02□□□□□ -0.96
CUX1-203ENST00000360264 FGFBP1Q14512 234 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 ADOQ96SZ5 270 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 IGKV6-21A0A0C4DH24 114 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 MBLAC1A4D2B0 266 aaPredicted RBP9.02□□□□□ -0.96
CUX1-203ENST00000360264 TPPPO94811 219 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 PRKAR1BP31321 381 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 CORINQ9Y5Q5 1042 aa9.02□□□□□ -0.96
CUX1-203ENST00000360264 HOXA11P31270 313 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 CLDN2P57739 230 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 IL20RBQ6UXL0 311 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 A0A1W2PQ09 198 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 TLCD2A6NGC4 264 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 SERPINF1P36955 418 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 C12orf76Q8N812 135 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 WASH6PQ9NQA3 447 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 A0A0A6YYC8 382 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 I3L1I5 382 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 HCRTO43612 131 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 TFPTP0C1Z6 253 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 ELK1P19419 428 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 RNF144AP50876 292 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 NOX3Q9HBY0 568 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 CRYZL1O95825 349 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 PIN1Q13526 163 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 ADGRG3Q86Y34 549 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 P2RY14Q15391 338 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 ENTPD8Q5MY95 495 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 SFRP4Q6FHJ7 346 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 C15orf39Q6ZRI6 1047 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 BPIFB2Q8N4F0 458 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 ZNF395Q9H8N7 513 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 KLK4Q9Y5K2 254 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 MROH6A6NGR9 719 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 UPK1BO75841 260 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.02□□□□□ -0.972e-6■■■■■ 29.2
CUX1-203ENST00000360264 GLIS1Q8NBF1 620 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 ACPTQ9BZG2 426 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 NLKQ9UBE8 527 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 TMEM200CA6NKL6 621 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 NPRL2Q8WTW4 380 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 H0YGG7 62 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 CHRNEQ04844 493 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 MAP4K2Q12851 820 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 GALEQ14376 348 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 GGTA1PQ4G0N0 100 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 Q6ZTK2 550 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 HSD3B7Q9H2F3 369 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 CCDC168Q8NDH2 2452 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 PHRF1Q9P1Y6 1649 aaKnown RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 ZNF300Q96RE9 604 aaPredicted RBP9.02□□□□□ -0.97
CUX1-203ENST00000360264 AGPAT4Q9NRZ5 378 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 ZNF355PQ9NSJ1 428 aa9.02□□□□□ -0.97
CUX1-203ENST00000360264 SNED1Q8TER0 1413 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 K7ERQ8 282 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 OR8U8P0C7N1 319 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 LTBQ06643 244 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 EDN1P05305 212 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 TBPP20226 339 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 CYB561P49447 251 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 RPS18P62269 152 aaKnown RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 PLA2G7Q13093 441 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 IKZF1Q13422 519 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 OGFOD3Q6PK18 319 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 BPIFA2Q96DR5 249 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 OR7C1O76099 320 aaPredicted RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 ANXA7P20073 488 aaKnown RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 MEX3BQ6ZN04 569 aaKnown RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 AAED1Q7RTV5 226 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 DNAJA3Q96EY1 480 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 LHPPQ9H008 270 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 OR52D1Q9H346 318 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 SAGE1Q9NXZ1 904 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ITGB4P16144 1822 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 LOC100289279A0A1B0GTE1 492 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 CLDN1O95832 211 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms