RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ARHGAP9Q9BRR9 750 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 BEX1Q9HBH7 125 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 NTMQ9P121 344 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 TRAV6A0A075B6T7 132 aa12.71□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.37
TRIM4-201ENST00000349062 TACR3P29371 465 aa12.71□□□□□ -0.37
TRIM4-201ENST00000349062 CTXN1P60606 82 aa12.71□□□□□ -0.37
TRIM4-201ENST00000349062 PLK5Q496M5 336 aa12.71□□□□□ -0.37
TRIM4-201ENST00000349062 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
TRIM4-201ENST00000349062 KRT74Q7RTS7 529 aa12.71□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF550Q7Z398 422 aa12.71□□□□□ -0.37
TRIM4-201ENST00000349062 AKIRIN1Q9H9L7 192 aaPredicted RBP12.71□□□□□ -0.37
TRIM4-201ENST00000349062 IKZF2Q9UKS7 526 aa12.71□□□□□ -0.37
TRIM4-201ENST00000349062 A0A087WV48 116 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 TIAF1O95411 115 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 AK1P00568 194 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 UBL4AP11441 157 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 CPEP16870 476 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 NAT1P18440 290 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 DRD5P21918 477 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 RORAP35398 523 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 MAP2K3P46734 347 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 GAS1P54826 345 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.71□□□□□ -0.38
TRIM4-201ENST00000349062 BICRALQ6AI39 1079 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 OR5W2Q8NH69 310 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 OR11A1Q9GZK7 315 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 APMAPQ9HDC9 416 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 NPAP1Q9NZP6 1156 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 COPS7AQ9UBW8 275 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 CLDN16Q9Y5I7 305 aa12.71□□□□□ -0.38
TRIM4-201ENST00000349062 IFNGP01579 166 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 PEPDP12955 493 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 SOX2P48431 317 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 SNTA1Q13424 505 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 FAM199XQ6PEV8 388 aaPredicted RBP12.7□□□□□ -0.38
TRIM4-201ENST00000349062 DUSP19Q8WTR2 217 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 KTI12Q96EK9 354 aaPredicted RBP12.7□□□□□ -0.38
TRIM4-201ENST00000349062 GAL3ST1Q99999 423 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 RIF1Q5UIP0 2472 aaKnown RBP12.7□□□□□ -0.38
TRIM4-201ENST00000349062 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
TRIM4-201ENST00000349062 POLR1CO15160 346 aaPredicted RBP12.7□□□□□ -0.38
TRIM4-201ENST00000349062 IGLV3-19P01714 112 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 HSD17B7P56937 341 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 SPEM1Q8N4L4 309 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 SLC38A9Q8NBW4 561 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 MED30Q96HR3 178 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 PPIL3Q9H2H8 161 aaKnown RBP12.7□□□□□ -0.38
TRIM4-201ENST00000349062 CDCP1Q9H5V8 836 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 PRODH2Q9UF12 536 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 SLC35A3Q9Y2D2 325 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 KIF26BQ2KJY2 2108 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 MN1Q10571 1320 aaPredicted RBP12.7□□□□□ -0.38
TRIM4-201ENST00000349062 A0A1B0GTH9 108 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 MASP2O00187 686 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 KLF4O43474 513 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 NDUFB2O95178 105 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 HLA-DPB1P04440 258 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 ERP29P30040 261 aaKnown RBP12.7□□□□□ -0.38
TRIM4-201ENST00000349062 CTBP2P56545 445 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 TEKQ02763 1124 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 GARNL3Q5VVW2 1013 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 ZCCHC12Q6PEW1 402 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 ZNF613Q6PF04 617 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 CNIH2Q6PI25 160 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 CDH24Q86UP0 819 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 SETD6Q8TBK2 473 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 GPR119Q8TDV5 335 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 VN1R1Q9GZP7 353 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 ANKRD19PQ9H560 264 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 UBQLN4Q9NRR5 601 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 BABAM2Q9NXR7 383 aa12.7□□□□□ -0.38
TRIM4-201ENST00000349062 PLA2G10O15496 165 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 HIST1H2ABP04908 130 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 CXCR1P25024 350 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 FGFBP1Q14512 234 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 PON3Q15166 354 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 ESPNLQ6ZVH7 1005 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 HIST3H2AQ7L7L0 130 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 JAZF1Q86VZ6 243 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 IZUMO1Q8IYV9 350 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 LNX2Q8N448 690 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 ZNF615Q8N8J6 731 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 LRRC20Q8TCA0 184 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 HIST1H2ACQ93077 130 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 C3orf49Q96BT1 292 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 NECAB3Q96P71 396 aaPredicted RBP12.69□□□□□ -0.38
TRIM4-201ENST00000349062 SLC25A18Q9H1K4 315 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 NARFLQ9H6Q4 476 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 CMC2Q9NRP2 79 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 ACOXLQ9NUZ1 547 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 TMEM5Q9Y2B1 443 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 A0A075B6Q4 140 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 LILRA5A6NI73 299 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 TSPAN4O14817 238 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 SLC25A12O75746 678 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 LYPD3O95274 346 aa12.69□□□□□ -0.38
TRIM4-201ENST00000349062 SBK2P0C263 348 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms