RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 EPHX4Q8IUS5 362 aa18.43■□□□□ 0.54
RAB28-203ENST00000338176 VANGL1Q8TAA9 524 aaPredicted RBP18.43■□□□□ 0.54
RAB28-203ENST00000338176 TMUB1Q9BVT8 246 aa18.43■□□□□ 0.54
RAB28-203ENST00000338176 SF3B5Q9BWJ5 86 aaKnown RBP18.43■□□□□ 0.54
RAB28-203ENST00000338176 BEX4Q9NWD9 120 aaPredicted RBP18.43■□□□□ 0.54
RAB28-203ENST00000338176 UPB1Q9UBR1 384 aa18.43■□□□□ 0.54
RAB28-203ENST00000338176 MTORP42345 2549 aa18.43■□□□□ 0.54
RAB28-203ENST00000338176 A0A0B4J2E0 115 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 A0A1B0GX12 115 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 OR5H1A6NKK0 313 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 SELENOPP49908 381 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 CDH12P55289 794 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 NRF1Q16656 503 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 VMACQ2NL98 169 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 TIMM23BQ5SRD1 257 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 CREB3L2Q70SY1 520 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 CALHM3Q86XJ0 350 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 OR6T1Q8NGN1 323 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 SLC38A4Q969I6 547 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 TMEM45BQ96B21 275 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 MCHR1Q99705 422 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 C12orf10Q9HB07 376 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 TMEM27Q9HBJ8 222 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 TAS2R16Q9NYV7 291 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 RNF115Q9Y4L5 304 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 USF3Q68DE3 2245 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 HOXC12P31275 282 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 LTBQ06643 244 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 GABRA6Q16445 453 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 ADAM5Q6NVV9 412 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 ULK3Q6PHR2 472 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 KBTBD8Q8NFY9 601 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 DNAJA4Q8WW22 397 aaPredicted RBP18.42■□□□□ 0.54
RAB28-203ENST00000338176 C1QTNF6Q9BXI9 259 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 PARPBPQ9NWS1 579 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 GMPR2Q9P2T1 348 aaKnown RBP18.42■□□□□ 0.54
RAB28-203ENST00000338176 CAPN7Q9Y6W3 813 aa18.42■□□□□ 0.54
RAB28-203ENST00000338176 CPSF4LA6NMK7 179 aaKnown RBP18.41■□□□□ 0.54
RAB28-203ENST00000338176 LRRN3E7EW58 273 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 M0R082 166 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 HS3ST1O14792 307 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 CD3EP07766 207 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 CD99P14209 185 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 CDH2P19022 906 aaPredicted RBP18.41■□□□□ 0.54
RAB28-203ENST00000338176 GRPRP30550 384 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 NKX6-1P78426 367 aaPredicted RBP18.41■□□□□ 0.54
RAB28-203ENST00000338176 C20orf204Q6ZNR8 217 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 BHLHE22Q8NFJ8 381 aaPredicted RBP18.41■□□□□ 0.54
RAB28-203ENST00000338176 ZNF417Q8TAU3 575 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 RCN3Q96D15 328 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 MUCL1Q96DR8 90 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 SLC47A1Q96FL8 570 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 ZNF587Q96SQ5 575 aaPredicted RBP18.41■□□□□ 0.54
RAB28-203ENST00000338176 ESRP2Q9H6T0 727 aaKnown RBP18.41■□□□□ 0.54
RAB28-203ENST00000338176 B3GAT1Q9P2W7 334 aa18.41■□□□□ 0.54
RAB28-203ENST00000338176 A0A087WUJ7 227 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 SMPD2O60906 423 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 THY1P04216 161 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 TNFRSF1BP20333 461 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 SLC25A3Q00325 362 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 FAM91A1Q658Y4 838 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 WDR88Q6ZMY6 472 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 LINGO2Q7L985 606 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 PATL1Q86TB9 770 aaKnown RBP18.4■□□□□ 0.54
RAB28-203ENST00000338176 RANBP3LQ86VV4 465 aaPredicted RBP18.4■□□□□ 0.54
RAB28-203ENST00000338176 WDR31Q8NA23 367 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 IGFBPL1Q8WX77 278 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 PERPQ96FX8 193 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 ZNF583Q96ND8 569 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 ECSITQ9BQ95 431 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 SLCO5A1Q9H2Y9 848 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 RASD1Q9Y272 281 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 SLC25A15Q9Y619 301 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 ALPK2Q86TB3 2170 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 TRAV36DV7A0A075B6V5 113 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 BBIP1A8MTZ0 92 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 ZNF83P51522 516 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 MAPRE2Q15555 327 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 COQ5Q5HYK3 327 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 ENTPD8Q5MY95 495 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 FAM69AQ5T7M9 428 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 NIPAL3Q6P499 406 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 OR8J3Q8NGG0 315 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 PIGTQ969N2 578 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 MUS81Q96NY9 551 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 MOGAT1Q96PD6 335 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 USB1Q9BQ65 265 aaKnown RBP18.4■□□□□ 0.54
RAB28-203ENST00000338176 NGBQ9NPG2 151 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 SELENONQ9NZV5 590 aa18.4■□□□□ 0.54
RAB28-203ENST00000338176 UPK3AO75631 287 aa18.39■□□□□ 0.53
RAB28-203ENST00000338176 LYPD3O95274 346 aa18.39■□□□□ 0.53
RAB28-203ENST00000338176 GTF2E2P29084 291 aaKnown RBP18.39■□□□□ 0.53
RAB28-203ENST00000338176 SEC24CP53992 1094 aa18.39■□□□□ 0.53
RAB28-203ENST00000338176 CLDN17P56750 224 aa18.39■□□□□ 0.53
RAB28-203ENST00000338176 SPOCK1Q08629 439 aa18.39■□□□□ 0.53
RAB28-203ENST00000338176 SLC26A7Q8TE54 656 aa18.39■□□□□ 0.53
RAB28-203ENST00000338176 ALKBH3Q96Q83 286 aaPredicted RBP18.39■□□□□ 0.53
RAB28-203ENST00000338176 FZD7O75084 574 aa18.38■□□□□ 0.53
RAB28-203ENST00000338176 VAMP5O95183 116 aa18.38■□□□□ 0.53
RAB28-203ENST00000338176 HPRP00739 348 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms