RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NPIPB15A6NHN6 443 aaPredicted RBP8.21□□□□□ -1.1
COL6A5-202ENST00000312481 K7EPK0 472 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 KHNYNO15037 678 aaKnown RBP8.21□□□□□ -1.1
COL6A5-202ENST00000312481 TCRBP04435 133 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 OR8U9P0C7N5 309 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 ACHEP22303 614 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 GDF5P43026 501 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 GRIN2CQ14957 1233 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CST6Q15828 149 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF789Q5FWF6 425 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 PLPP4Q5VZY2 271 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 NAGSQ8N159 534 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 FAM71E2Q8N5Q1 922 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 APH1BQ8WW43 257 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 ASB12Q8WXK4 309 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 ZBTB8AQ96BR9 441 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 MS4A8Q9BY19 250 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CNTNAP3Q9BZ76 1288 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CHRDQ9H2X0 955 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 C1orf198Q9H425 327 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 KIR3DX1Q9H7L2 352 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 PPIL1Q9Y3C6 166 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CCL16O15467 120 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 SSX4O60224 188 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 HEXBP07686 556 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CYBAP13498 195 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 RAB38P57729 211 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 SLC35A1P78382 337 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 FAM129CQ86XR2 697 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 OR52E2Q8NGJ4 325 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 GIMAP1Q8WWP7 306 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 P2RY12Q9H244 342 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 hCG_1807616A0A1W2PRN6 198 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM221A6NGB7 291 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 GPR171O14626 319 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SCAMP1O15126 338 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 CSF2P04141 144 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 LTBQ06643 244 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 LY6G5CQ5SRR4 150 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 NRARPQ7Z6K4 114 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 FAM124AQ86V42 546 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 LILRA2Q8N149 483 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 ZDHHC22Q8N966 263 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 RBPMSQ93062 196 aaKnown RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 MARVELD1Q9BSK0 173 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 PADI1Q9ULC6 663 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 HS3ST3A1Q9Y663 406 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 ETV3P41162 512 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SURF2Q15527 256 aaPredicted RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 FAM71CQ8NEG0 241 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 CREB3L4Q8TEY5 395 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 PIGKQ92643 395 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 TAAR8Q969N4 342 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 RBM38Q9H0Z9 239 aaKnown RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 CMC2Q9NRP2 79 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM184BQ9Y519 407 aaPredicted RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF264O43296 627 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 IQCF3P0C7M6 154 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 GIFP27352 417 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 ATP1B3P54709 279 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SOHLH1Q5JUK2 328 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 CCDC116Q8IYX3 515 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 ZCCHC10Q8TBK6 192 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 HRASLS2Q9NWW9 162 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 HAO2Q9NYQ3 351 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 A8MX80 341 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 MT-ND4LP03901 98 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 GUSBP08236 651 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 METTL15P1P0C7V9 234 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SLC2A5P22732 501 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SOX3P41225 446 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 OR1E2P47887 323 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 ERVK-16P61578 105 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 MAVSQ7Z434 540 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 MIB2Q96AX9 1013 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 DHRS1Q96LJ7 313 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM100Q9NV29 134 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 B4DXG7 233 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 H0YIG0 161 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SOX1O00570 391 aaPredicted RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 CLIC3O95833 236 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 HNRNPA2B1P22626 353 aaKnown RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 EFNA3P52797 238 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SLC25A1P53007 311 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SYT14P1Q58G82 188 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 MRPS24Q96EL2 167 aaKnown RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 CIB3Q96Q77 187 aaPredicted RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SPTAN1Q13813 2472 aaKnown RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 TRABD2BA6NFA1 517 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 C9JVG2 144 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 DTYMKP23919 212 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 GZMKP49863 264 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 DEFA6Q01524 100 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF585AQ6P3V2 769 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SYT13Q7L8C5 426 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 MDGA2Q7Z553 956 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 OR1J1Q8NGS3 322 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 EMG1Q92979 244 aaKnown RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 A0A1W2PRU2 124 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 CCL22O00626 93 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms