RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SLC6A5Q9Y345 797 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 LIPT2A6NK58 231 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 TFECO14948 347 aaPredicted RBP17■□□□□ 0.31
PDLIM3-202ENST00000284770 WBP4O75554 376 aaKnown RBP17■□□□□ 0.31
PDLIM3-202ENST00000284770 BMP7P18075 431 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 CDC42P60953 191 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 GINS1Q14691 196 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 PLEKHN1Q494U1 663 aaPredicted RBP17■□□□□ 0.31
PDLIM3-202ENST00000284770 RBM48Q5RL73 367 aaKnown RBP17■□□□□ 0.31
PDLIM3-202ENST00000284770 DEPDC4Q8N2C3 294 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 SAMD8Q96LT4 415 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 TAPBPLQ9BX59 468 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 DEFB127Q9H1M4 99 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC6A15Q9H2J7 730 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 RASSF1Q9NS23 344 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 LHX6Q9UPM6 363 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 TRAPPC4Q9Y296 219 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 HIF3AQ9Y2N7 669 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 A0A1W2PNR3 127 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 FZD7O75084 574 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 TSPAN19P0C672 248 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 CRHBPP24387 322 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 GRPRP30550 384 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 PRPS1P60891 318 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 C19orf57Q0VDD7 668 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 OR7A5Q15622 319 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 INAQ16352 499 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 ACSM5Q6NUN0 579 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 TMPPEQ6ZT21 453 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 CCDC103Q8IW40 242 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 IQCF1Q8N6M8 205 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 SMPDL3BQ92485 455 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 ZNF566Q969W8 418 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 MIB2Q96AX9 1013 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 KLHL15Q96M94 604 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 TAAR6Q96RI8 345 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 TSSK6Q9BXA6 273 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 ASPNQ9BXN1 380 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 ENKD1Q9H0I2 346 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 ZNF71Q9NQZ8 489 aaPredicted RBP17■□□□□ 0.31
PDLIM3-202ENST00000284770 TBC1D23Q9NUY8 699 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 IL20RAQ9UHF4 553 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 ZMIZ1Q9ULJ6 1067 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 CORINQ9Y5Q5 1042 aa17■□□□□ 0.31
PDLIM3-202ENST00000284770 BLOC1S5-TXNDC5H3BN57 136 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 M0R129 80 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 NDUFB2O95178 105 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 POU3F2P20265 443 aaPredicted RBP16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 APOFQ13790 326 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 CLEC12AQ5QGZ9 265 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC27A4Q6P1M0 643 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 THSD4Q6ZMP0 1018 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 NANOGNBQ7Z5D8 188 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC43A2Q8N370 569 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 OR52L1Q8NGH7 329 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 OR5J2Q8NH18 312 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 NEIL3Q8TAT5 605 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 IMPAD1Q9NX62 359 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 ALKBH4Q9NXW9 302 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 MRPL39Q9NYK5 338 aaKnown RBP16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 CACNA1GO43497 2377 aa16.99■□□□□ 0.31
PDLIM3-202ENST00000284770 A0A0J9YW62 118 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 SULT2B1O00204 365 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC1A7O00341 560 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 SMNDC1O75940 238 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 PMS2P2O95744 297 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 GTF2E2P29084 291 aaKnown RBP16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 UQCRC1P31930 480 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 STARP49675 285 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 DIO1P49895 249 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 SMSP52788 366 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 CLDN20P56880 219 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 CXCR4P61073 352 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 SGCBQ16585 318 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 GXYLT1Q4G148 440 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 TRILQ7L0X0 811 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 GGNQ86UU5 652 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 SCAIQ8N9R8 606 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 TSPAN14Q8NG11 270 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 PNPLA2Q96AD5 504 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 LDAHQ9H6V9 325 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 SEC14L4Q9UDX3 406 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 FREM3P0C091 2139 aa16.98■□□□□ 0.31
PDLIM3-202ENST00000284770 TRGV5A0A0B4J1U4 118 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 M0R082 166 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 ACTL6AO96019 429 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 IGHG3P01860 377 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 CCDC159P0C7I6 412 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 FMO3P31513 532 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 AQP2P41181 271 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 LHX2P50458 406 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 OR2B6P58173 313 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC35A1P78382 337 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 EFNB1P98172 346 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 TEKQ02763 1124 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 SMN1Q16637 294 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 NADK2Q4G0N4 442 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 ESPNLQ6ZVH7 1005 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 H1FNTQ75WM6 255 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 OR2T33Q8NG76 320 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms