RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ABHD11Q8NFV4 315 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 ZFAND1Q8TCF1 268 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 HRASLSQ9HDD0 168 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 TSPAN4O14817 238 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 HSD17B8Q92506 261 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 RANBP3Q9H6Z4 567 aaPredicted RBP12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 PRAMEF4O60810 478 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 KNG1P01042 644 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 STSP08842 583 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 PTAFRP25105 342 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 EVI2BP34910 448 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 SELENBP1Q13228 472 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 RUNDC3AQ59EK9 446 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 VRK3Q8IV63 474 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 PATE1Q8WXA2 126 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 ITGB1BP2Q9UKP3 347 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC5A10A0PJK1 596 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 PGGHGQ32M88 737 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC22A6Q4U2R8 563 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 CMTM4Q8IZR5 234 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 FRMD1Q8N878 549 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 DMRTB1Q96MA1 342 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 FAM173AQ9BQD7 235 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 SAP130Q9H0E3 1048 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 SNAP29O95721 258 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 DEFA4P12838 97 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 EPHA8P29322 1005 aaPredicted RBP12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 CX3CR1P49238 355 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 GABARAPL2P60520 117 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 CXCR4P61073 352 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 PODNL1Q6PEZ8 512 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF554Q86TJ5 538 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 DNAJC22Q8N4W6 341 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 SNAPC3Q92966 411 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 C1QTNF6Q9BXI9 259 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 LHPPQ9H008 270 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 EGLN3Q9H6Z9 239 aa12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 SDR39U1Q9NRG7 319 aaPredicted RBP12.55□□□□□ -0.4
PDGFRB-201ENST00000261799 TRAV6A0A075B6T7 132 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC34A2O95436 690 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 POU2F2P09086 479 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 S100PP25815 95 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 CD97P48960 835 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 PGAP1Q75T13 922 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 FAM185AQ8N0U4 392 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC7A13Q8TCU3 470 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF346Q9UL40 294 aaKnown RBP12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 GFRA3O60609 400 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 PSMB10P40306 273 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 RPL23AP62750 156 aaKnown RBP12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 ATXN7L3Q14CW9 347 aaPredicted RBP12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 SIX1Q15475 284 aaPredicted RBP12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 LRRC37A5PQ49AS3 106 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF534Q76KX8 674 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC43A2Q8N370 569 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 GJC3Q8NFK1 279 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 CD300LFQ8TDQ1 290 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 ZBTB8AQ96BR9 441 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 IGHV1OR15-9A0A0B4J2B8 117 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 CNIH1O95406 144 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 PAX7P23759 505 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 TAS2R20P59543 309 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 RIPPLY1Q0D2K3 151 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 SSPNQ14714 243 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 OR7E24Q6IFN5 339 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 TMEM185AQ8NFB2 350 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 PRKRAO75569 313 aaKnown RBP12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 MYF5P13349 255 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC35F3Q8IY50 421 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 CA13Q8N1Q1 262 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 OR4A16Q8NH70 328 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 SULT4A1Q9BR01 284 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 TEX101Q9BY14 249 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF71Q9NQZ8 489 aaPredicted RBP12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF732B4DXR9 585 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 GABARAPH6UMI1 98 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 GABARAPO95166 117 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 TK1P04183 234 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 ZDHHC11BP0C7U3 371 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 PRSS3P35030 304 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 CLDN15P56746 228 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 MAB21L1Q13394 359 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 NHSL2Q5HYW2 709 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 TMEM236Q5W0B7 351 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF517Q6ZMY9 492 aaPredicted RBP12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 TMEM163Q8TC26 289 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 MGLLQ99685 303 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 TJP1Q07157 1748 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 SNNO75324 88 aaPredicted RBP12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 DNAJB5O75953 348 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 KCNK2O95069 426 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 ST6GAL1P15907 406 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 L3MBTL4Q8NA19 623 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms