RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 DPAGT1Q9H3H5 408 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 AUNIPQ9H7T9 357 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 ZFP64Q9NPA5 681 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 SLCO1C1Q9NYB5 712 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 DHCR7Q9UBM7 475 aaKnown RBP12.03□□□□□ -0.48
CTNS-201ENST00000046640 SLC22A31A6NKX4 558 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 TRIM3O75382 744 aaPredicted RBP12.03□□□□□ -0.48
CTNS-201ENST00000046640 AK1P00568 194 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 HRGP04196 525 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 HK1P19367 917 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 PER3P56645 1201 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 ERVK-25P63136 954 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 FHL1Q13642 323 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 GALEQ14376 348 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 PRTGQ2VWP7 1150 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 ZBTB37Q5TC79 503 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 FAAH2Q6GMR7 532 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 CBLN3Q6UW01 205 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 PIAS4Q8N2W9 510 aaPredicted RBP12.03□□□□□ -0.48
CTNS-201ENST00000046640 ZNF680Q8NEM1 530 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 OR6K6Q8NGW6 343 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 RASD2Q96D21 266 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 CLDN16Q9Y5I7 305 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 MTCH2Q9Y6C9 303 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 LRP4O75096 1905 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 TRIOBPQ9H2D6 2365 aa12.03□□□□□ -0.48
CTNS-201ENST00000046640 A0A1B0GVT2 93 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 OIP5O43482 229 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 PTHLHP12272 177 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 PSMB10P40306 273 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 CCR5P51681 352 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 UBXN2BQ14CS0 331 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 SLC36A2Q495M3 483 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 ESCO2Q56NI9 601 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 OTPQ5XKR4 325 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 LUZP2Q86TE4 346 aa12.02□□□□□ -0.48
CTNS-201ENST00000046640 MRPS33Q9Y291 106 aaKnown RBP12.02□□□□□ -0.48
CTNS-201ENST00000046640 C17orf105B2RV13 164 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 MT-ND5P03915 603 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 FCER2P06734 321 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 HPGDP15428 266 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 ST3GAL2Q16842 350 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 TEX261Q6UWH6 196 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 MED25Q71SY5 747 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 ZNF671Q8TAW3 534 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 GIMAP1Q8WWP7 306 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 ACOT12Q8WYK0 555 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 TSSK2Q96PF2 358 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 GAL3ST4Q96RP7 486 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 TRIM2Q9C040 744 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.02□□□□□ -0.49
CTNS-201ENST00000046640 KCNN3Q9UGI6 736 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 PPIEQ9UNP9 301 aaKnown RBP12.02□□□□□ -0.49
CTNS-201ENST00000046640 U3KQ87 197 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 MPDZO75970 2070 aa12.02□□□□□ -0.49
CTNS-201ENST00000046640 IGHV1OR15-9A0A0B4J2B8 117 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 IDSB3KWA1 339 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 FMO6PO60774 539 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 SLC22A5O76082 557 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 TFP02787 698 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 RAB3BP20337 219 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 SLC6A6P31641 620 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 GPR3P46089 330 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CAPZBP47756 277 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CLDN12P56749 244 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CD226Q15762 336 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CDONQ4KMG0 1287 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ULK3Q6PHR2 472 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 GLRX5Q86SX6 157 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 PHOSPHO1Q8TCT1 267 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 TSLPQ969D9 159 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ZNF524Q96C55 264 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 MSANTD3Q96H12 275 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 LMF2Q9BU23 707 aaKnown RBP12.01□□□□□ -0.49
CTNS-201ENST00000046640 ERVMER34-1Q9H9K5 563 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 RP1P56715 2156 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 WDFY3Q8IZQ1 3526 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 SELENOFO60613 162 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 PRAMEF2O60811 474 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ADRB1P08588 477 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ANXA3P12429 323 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ATF1P18846 271 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 NPR2P20594 1047 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 F8A1P23610 371 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CD1CP29017 333 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CSNK1EP49674 416 aaKnown RBP12.01□□□□□ -0.49
CTNS-201ENST00000046640 FAAP20Q6NZ36 180 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ZNF433Q8N7K0 673 aaPredicted RBP12.01□□□□□ -0.49
CTNS-201ENST00000046640 TTC9Q92623 222 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 PDCD1LG2Q9BQ51 273 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 FOXQ1Q9C009 403 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 GHITMQ9H3K2 345 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 C14orf105Q9NVL8 296 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 COL6A3P12111 3177 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 A0A087WV48 116 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ANKRD61A6NGH8 418 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 SERINC4A6NH21 518 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CHURC1-FNTBB4DL54 471 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CDK2AP1O14519 115 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms