RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Nob1Q8BW10 403 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Slc5a8Q8BYF6 611 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Olfr881Q8VF63 314 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Cpn2Q9DBB9 547 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Slc26a10Q5EBI0 492 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 PfplQ5RKV8 702 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Ubtd2Q6PGH0 234 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Tmem216Q9CQC4 141 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Mbd3l1Q9D9H3 186 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Ccdc107Q9DCC3 242 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Polg2Q9QZM2 459 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Vmn1r10W4VSP8 311 aa17.1■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Kcng2F7A6P6 480 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Cept1Q8BGS7 416 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Zdhhc5Q8VDZ4 715 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Olfr601A2RS33 314 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Slc9a3r1P70441 355 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Dcdc2Q5DU00 475 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Prr11Q8BHE0 368 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Ptcd2Q8R3K3 381 aaKnown RBP17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Rab40bQ8VHP8 278 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Elovl4Q9EQC4 312 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Slc15a1Q9JIP7 709 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Gm6880A3KG45 208 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 NlkO54949 527 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Emc8O70378 207 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Tcte3P11985 191 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Ms4a15Q3UPL6 245 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Mettl7a2Q5I0W6 244 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Slc25a41Q8BVN7 312 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Vwc2Q8C8N3 324 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 DynapQ9D7M5 161 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Hoxa4P06798 285 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Rab3aP63011 220 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 B130006D01RikQ8BRH6 153 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 RabepkQ8VCH5 380 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Dus3lQ91XI1 637 aaKnown RBP17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Chrm5Q920H4 532 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Slc19a3Q99PL8 488 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Tmem269Q9D4Y8 254 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Spaca1Q9DA48 305 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 9530002B09RikQ9EPV7 135 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 NinQ61043 2035 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Olfr1018A2ASV3 311 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Hsd17b12O70503 312 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Agbl5Q09M02 886 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Tor2aQ8R1J9 321 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Rgs6Q9Z2H2 472 aa17.09■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Rsu1Q01730 277 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 TpppQ7TQD2 218 aaKnown RBP17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Vrk1Q80X41 440 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Tmem200aQ8C817 491 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Pinx1Q9CZX5 332 aaKnown RBP17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Pfn4Q9D6I3 129 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Vmn1r40Q9EQ46 310 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Kcnip1Q9JJ57 227 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Gm45711E0CXA2 391 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Rln1P47932 185 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Gm7030Q0WXH6 285 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Mmp7Q10738 264 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 LpoQ5SW46 710 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Slc6a5Q761V0 799 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Olfr406Q7TRX0 323 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Bend7Q8BSV3 434 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Olfr1417Q8VGJ6 315 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Q8WUR0 141 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Hemk1Q921L7 340 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Fn3kQ9ER35 309 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 NpvfQ9ESQ8 188 aa17.08■□□□□ 0.33
Scaf11-201ENSMUST00000047835 Gm7951E9Q0A2 213 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Maml2F6U238 1170 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Gm6482F6YHC1 213 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Gm17124F6ZIG1 213 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Dscr3O35075 297 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 HbaP01942 142 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Polr2iP60898 125 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Emx1Q04742 257 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 HgfQ08048 728 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 LcorQ6ZPI3 433 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Olfr527Q7TRT9 305 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Chpt1Q8C025 398 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Mboat2Q8R3I2 519 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Gm2035J3QP87 144 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Olfr1221L7MU53 311 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 B3galt1O54904 326 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Olfr985Q8VGB4 311 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Vsx1Q91V10 363 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Rbms1Q91W59 403 aaKnown RBP17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Slamf9Q9D780 285 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Alyref2Q9JJW6 218 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Dnajb8Q9QYI7 227 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Zbtb34A2ATY4 518 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Gm5519D3Z175 170 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Sh3yl1O08641 340 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Megf11Q80T91 1091 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Olfr558Q8VGZ7 317 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Pop4Q9CR08 221 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Slc30a7Q9JKN1 378 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Chst11Q9JME2 352 aa17.08■□□□□ 0.32
Scaf11-201ENSMUST00000047835 Rd3lB2RV38 197 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms