RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ttf1Q62187 859 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1359Q7TQU5 313 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Baiap2Q8BKX1 535 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Sdhaf3Q8BQU3 125 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Ston1Q8CDJ8 730 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc25a45Q8CFJ7 288 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 MepceQ8K3A9 666 aaKnown RBP15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Rab38Q8QZZ8 211 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 C1qtnf2Q9D8U4 294 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Prl8a1Q9DAV8 240 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Stra6lQ9DBN1 621 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Dmrt1Q9QZ59 374 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Tmem156A0A1D5RLR8 321 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Gm10112D3YWP5 117 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Srp54bE9PXC0 504 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Zfp13P10754 512 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Hoxa2P31245 372 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Ucp3P56501 308 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Serpine2Q07235 397 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 CbfbQ08024 187 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Foxred1Q3TQB2 487 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Epha1Q60750 977 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 CalcrQ60755 533 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Clcn4Q61418 747 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Adam12Q61824 903 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Tas2r135Q7TQA9 312 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Lyrm4Q8K215 91 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Vmn1r74Q8R290 304 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 LgalslQ8VED9 172 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1043Q8VFK4 314 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Sfxn2Q925N2 322 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 GpnmbQ99P91 574 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Tprg1lQ9DBS2 266 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Dapp1Q9QXT1 280 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Nr4a3Q9QZB6 627 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 PpieQ9QZH3 301 aaKnown RBP15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Ilf3Q9Z1X4 898 aaKnown RBP15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Zfp735B1ARH2 734 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 PtgirP43252 415 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 ParpbpQ6IRT3 573 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc6a5Q761V0 799 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 JamlQ80UL9 379 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Gpr61Q8C010 449 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 H1fntQ8CJI4 398 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 DctdQ8K2D6 178 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Gdpd1Q9CRY7 314 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Hcfc1r1Q9CYQ5 120 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Ate1Q9Z2A5 516 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Trbv2A0A0B4J1G8 114 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Prss47A0A0N4SVQ0 395 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Igkv6-20A0A140T8P2 115 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Scgb2b3D2XZ38 112 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 MfngO09008 321 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 BckdkO55028 412 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Dll3O88516 592 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Brd7O88665 651 aaKnown RBP15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 FshrP35378 692 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Yes1Q04736 541 aaKnown RBP15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Q3KQP7 184 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Pcp4l1Q6W8Q3 68 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Ubfd1Q78JW9 368 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1031Q7TR87 336 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc25a40Q8BGP6 337 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Oscp1Q8BHW2 379 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Zfp189Q8BKP2 608 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc25a32Q8BMG8 316 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Fbxo45Q8K3B1 286 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Tmem185bQ8R3R5 350 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr99Q8VFE4 305 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 NansQ99J77 359 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc6a19Q9D687 634 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Cyp11a1Q9QZ82 526 aa15.15■□□□□ 0.02
Shh-201ENSMUST00000002708 Frem2Q6NVD0 3160 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm3952A0A0A6YXJ1 191 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Igkv17-127A0A0G2JDN5 117 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Fcn1O70165 334 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Cyp4a10O88833 509 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Rfx3P48381 749 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 H2-Eb2Q3UUV9 287 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm9758Q80ZT2 255 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Lkaaear1Q8BIG2 198 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Emc1Q8C7X2 997 aaKnown RBP15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Hist1h2aaQ8CGP4 129 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Mmp28Q8CGV8 520 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 GmdsQ8K0C9 372 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr1312Q8VF10 317 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr837Q8VFJ4 312 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Gtpbp3Q923K4 492 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Zmynd19Q9CQG3 227 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Otud1Q9CUB6 454 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Eif3kQ9DBZ5 218 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm45736A0A1B0GS18 427 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Dcpp2E9PYC2 171 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Cldn20G5E8X0 219 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Zfp870J3QMA4 560 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm21833J3QPK1 500 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Dcpp1L7N1X9 171 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Csf2raQ00941 388 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Fzd8Q61091 685 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Lrp11Q8CB67 483 aa15.14■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms