RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 APH1BQ8WW43 257 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 THAP4Q8WY91 577 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 ZBTB8AQ96BR9 441 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 DGCR14Q96DF8 476 aaKnown RBP15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 LRR1Q96L50 414 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 MESP1Q9BRJ9 268 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 TAPBPLQ9BX59 468 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 ASPNQ9BXN1 380 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 UBQLN3Q9H347 655 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 TIMMDC1Q9NPL8 285 aa15.23■□□□□ 0.03
TRAPPC3-210ENST00000617904 PRR23D1E9PI22 279 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 SURF4O15260 269 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ZNF208O43345 1280 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 PTP4A3O75365 173 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 CDK1P06493 297 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 PRR23D2P0DMB1 279 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 GABRB1P18505 474 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ITGA3P26006 1051 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ADH6P28332 368 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ALDH3B2P48448 385 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 CYB561P49447 251 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 OC90Q02509 493 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ATP1A4Q13733 1029 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ZNF74Q16587 644 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ACER2Q5QJU3 275 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 FAM69AQ5T7M9 428 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 DESI1Q6ICB0 168 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ACSM5Q6NUN0 579 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 POMZP3Q6PJE2 187 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 PLCZ1Q86YW0 608 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 SLC25A43Q8WUT9 341 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 ANGPTL4Q9BY76 406 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 PLA2G12AQ9BZM1 189 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 LHPPQ9H008 270 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 RACGAP1Q9H0H5 632 aa15.22■□□□□ 0.03
TRAPPC3-210ENST00000617904 IMPA2O14732 288 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 ENTPD6O75354 484 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 IGFBP1P08833 259 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 PRKCAP17252 672 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 MYL12AP19105 171 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 ATP6V1E1P36543 226 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 CLK1P49759 484 aaKnown RBP15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 ST13P50502 369 aaKnown RBP15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 GAS1P54826 345 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 DLX5P56178 289 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 LSM11P83369 360 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 C1DQ13901 141 aaKnown RBP15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 NEDD8Q15843 81 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 SLC25A53Q5H9E4 307 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 DCAF10Q5QP82 559 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 NXNL2Q5VZ03 156 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 SATL1Q86VE3 508 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 MEX3DQ86XN8 651 aaKnown RBP15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 CCDC103Q8IW40 242 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 OR1J4Q8NGS1 313 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 UBE2FQ969M7 185 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 TMEM80Q96HE8 168 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 TNFRSF13CQ96RJ3 184 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 SLC25A18Q9H1K4 315 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 GALNT9Q9HCQ5 603 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 CMC2Q9NRP2 79 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 MED11Q9P086 117 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 ERVK-18Q9QC07 812 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 CHRNA9Q9UGM1 479 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 ERGIC3Q9Y282 383 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 CORINQ9Y5Q5 1042 aa15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 CHCHD2Q9Y6H1 151 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 TLN1Q9Y490 2541 aaKnown RBP15.21■□□□□ 0.03
TRAPPC3-210ENST00000617904 TRAV27A0A087WT01 109 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 ZNF99A8MXY4 864 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 PRKYO43930 277 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 CBR3O75828 277 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 FADS2O95864 444 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 CELA2AP08217 269 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 APEHP13798 732 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 CCNA2P20248 432 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 PTNP21246 168 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 CDH11P55287 796 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 ST3GAL4Q11206 333 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 RAB40BQ12829 278 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 SMN1Q16637 294 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 SYT14P1Q58G82 188 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 EMC4Q5J8M3 183 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 LCN1P1Q5VSP4 162 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 C1orf140Q5VVS0 124 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 FCRLBQ6BAA4 426 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 CXXC5Q7LFL8 322 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 FAM98AQ8NCA5 519 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 ANKK1Q8NFD2 765 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 OR2M3Q8NG83 312 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 OR8D4Q8NGM9 314 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 GGHQ92820 318 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 OTULINQ96BN8 352 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 FRMD6Q96NE9 622 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 ERMAPQ96PL5 475 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 UTP23Q9BRU9 249 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 POTEKPQ9BYX7 375 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 STMN3Q9NZ72 180 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 DNAJC27Q9NZQ0 273 aa15.2■□□□□ 0.02
TRAPPC3-210ENST00000617904 WARS2Q9UGM6 360 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms