RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 IRAK1P51617 712 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 STC1P52823 247 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FAM53BQ14153 422 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 C1QL3Q5VWW1 255 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SHISA6Q6ZSJ9 500 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 NET1Q7Z628 596 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 TRABD2AQ86V40 505 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 WDR31Q8NA23 367 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 DMBX1Q8NFW5 382 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FBXO25Q8TCJ0 367 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 HSD17B8Q92506 261 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 RXFP3Q9NSD7 469 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CES1P1Q9UKY3 287 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 F13BP05160 661 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CALB2P22676 271 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SCN1AP35498 2009 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CAPGP40121 348 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PLAURQ03405 335 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 NR1I3Q14994 352 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PKP2Q99959 881 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 UBQLN4Q9NRR5 601 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 KCNIP3Q9Y2W7 256 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 OR51B4Q9Y5P0 310 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 GPR39O43194 453 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 RIPK2O43353 540 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 AK4P27144 223 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 PGAP1Q75T13 922 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PGAM4Q8N0Y7 254 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 MREGQ8N565 214 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ACOT4Q8N9L9 421 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 RPEQ96AT9 228 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZC3H10Q96K80 434 aaKnown RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 MARCH5Q9NX47 278 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 F10P00742 488 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SPATA31C1P0DKV0 1188 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 HOXD9P28356 352 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 SDC2P34741 201 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PRKCDQ05655 676 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CLINT1Q14677 625 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 TMEM105Q8N8V8 129 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ST6GALNAC3Q8NDV1 305 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PTPMT1Q8WUK0 201 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 CYGBQ8WWM9 190 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 BEX4Q9NWD9 120 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 MCUBQ9NWR8 336 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZNF446Q9NWS9 450 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FAM53CQ9NYF3 392 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 VWA7Q9Y334 891 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CDH10Q9Y6N8 788 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CTSVO60911 334 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CRMP1Q14194 572 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 NNATQ16517 81 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ARSKQ6UWY0 536 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 LRRC55Q6ZSA7 311 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CDH26Q8IXH8 852 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ABHD4Q8TB40 342 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SYNPRQ8TBG9 265 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 MYDGFQ969H8 173 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ELP4Q96EB1 424 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 NDNQ99608 321 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 LOC730098B7Z3J9 87 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 EPHB6O15197 1021 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 GSTZ1O43708 216 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 TGFB1P01137 390 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZNF888P0CJ79 500 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 SRD5A2P31213 254 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 LCP2Q13094 533 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 WBP2NLQ6ICG8 309 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 Q6ZS52 159 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SNX29P2Q8IUI4 249 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 EDARADDQ8WWZ3 215 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CAVIN3Q969G5 261 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SHISA4Q96DD7 197 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 P2RY11Q96G91 374 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SLC46A2Q9BY10 475 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CCM2LQ9NUG4 571 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 A0A087WWV3 80 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 NPIPB15A6NHN6 443 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 AHRRA9YTQ3 701 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 APEX1P27695 318 aaKnown RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 CLDN17P56750 224 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 IZUMO4Q1ZYL8 232 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FRG2Q64ET8 278 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 LCN8Q6JVE9 175 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZNF813Q6ZN06 617 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SPATC1Q76KD6 591 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 TMPRSS9Q7Z410 1059 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZFAND4Q86XD8 727 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 MARK4Q96L34 752 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FRG2BQ96QU4 278 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 BARD1Q99728 777 aaKnown RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 PTDSS2Q9BVG9 487 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 MDC1Q14676 2089 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 PAX6P26367 422 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 SLC9A3P48764 834 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 ZNF529Q6P280 563 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 SCUBE1Q8IWY4 988 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 TWIST2Q8WVJ9 160 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 SGTBQ96EQ0 304 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 OR2A14Q96R47 310 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms