RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RLN1P04808 185 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 HOXB2P14652 356 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 COL9A1P20849 921 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 BLVRAP53004 296 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 PLA2G7Q13093 441 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 CDK5R1Q15078 307 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 ZMYND11Q15326 602 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 USP53Q70EK8 1073 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 ABHD13Q7L211 337 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 COMMD7Q86VX2 200 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 CSNK1A1LQ8N752 337 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 MOSPD2Q8NHP6 518 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 NR4A3Q92570 626 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 RBM18Q96H35 190 aaKnown RBP12.91□□□□□ -0.34
COL6A1-207ENST00000612273 MRPL39Q9NYK5 338 aaKnown RBP12.91□□□□□ -0.34
COL6A1-207ENST00000612273 ST6GALNAC2Q9UJ37 374 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 NUBP2Q9Y5Y2 271 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 FKBP7Q9Y680 259 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 CABIN1Q9Y6J0 2220 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 SPACA6W5XKT8 324 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 LYPD3O95274 346 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 AGR2O95994 175 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 RAF1P04049 648 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 NANOS3P60323 173 aaKnown RBP12.9□□□□□ -0.34
COL6A1-207ENST00000612273 BTG1P62324 171 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 BTG2P78543 158 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 FAM60AQ9NP50 221 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 PRR32B1ATL7 298 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 PIN1P1O15428 100 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 ARL6IP5O75915 188 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 ADH1BP00325 375 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 SRMP19623 302 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 AQP2P41181 271 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 LEG1Q6P5S2 330 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 TMPRSS11FQ6ZWK6 438 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 MS4A15Q8N5U1 240 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 CAMKVQ8NCB2 501 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 UBL7Q96S82 380 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-207ENST00000612273 RANBP3Q9H6Z4 567 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-207ENST00000612273 NCDNQ9UBB6 729 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 MGAT4CQ9UBM8 478 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 VPS13AQ96RL7 3174 aa12.9□□□□□ -0.34
COL6A1-207ENST00000612273 URADA6NGE7 173 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 BRINP1O60477 761 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 ZFPL1O95159 310 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 KLF8O95600 359 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-207ENST00000612273 CSTAP01040 98 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 MAOBP27338 520 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 ZP1P60852 638 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 CAMK2DQ13557 499 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 GRK1Q15835 563 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 PRICKLE4Q2TBC4 344 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 NHLRC1Q6VVB1 395 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 MEIOBQ8N635 442 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 OR8S1Q8NH09 359 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 SYNPRQ8TBG9 265 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 DLL4Q9NR61 685 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 RDH8Q9NYR8 311 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 NUP210Q8TEM1 1887 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-207ENST00000612273 H0YC42 278 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 PTP4A3O75365 173 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 PDGFAP04085 211 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 THBS1P07996 1170 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 FCARP24071 287 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 PSG6Q00889 435 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 RIN1Q13671 783 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 ANGPT1Q15389 498 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 TPRA1Q86W33 373 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 TMPRSS12Q86WS5 348 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 OR10AC1Q8NH08 325 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 SMIM19Q96E16 107 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 ELMOD3Q96FG2 381 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL6A1-207ENST00000612273 CA10Q9NS85 328 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 MED12Q93074 2177 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 A0A0B4J2E0 115 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 A0A1B0GX12 115 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 TSPAN4O14817 238 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 LINC01565O15544 149 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 CBX7O95931 251 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 POU3F2P20265 443 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-207ENST00000612273 MAOAP21397 527 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 TAS2R43P59537 309 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 CEBPEQ15744 281 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 TMEM69Q5SWH9 247 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 PXKQ7Z7A4 578 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 PRSS58Q8IYP2 241 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 RNF113BQ8IZP6 322 aaKnown RBP12.89□□□□□ -0.35
COL6A1-207ENST00000612273 AVL9Q8NBF6 648 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 RCBTB1Q8NDN9 531 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 ADAMTS14Q8WXS8 1223 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 HERVK_113Q902F9 699 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 RSC1A1Q92681 617 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
COL6A1-207ENST00000612273 PILRAQ9UKJ1 303 aa12.89□□□□□ -0.35
COL6A1-207ENST00000612273 M0R233 179 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 NDUFB2O95178 105 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms