RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 PRPF19Q9UMS4 504 aaKnown RBP3.36□□□□□ -1.87
IGHV3-29-201ENST00000604817 GAB2Q9UQC2 676 aa3.36□□□□□ -1.87
IGHV3-29-201ENST00000604817 EIF3LQ9Y262 564 aaKnown RBP3.36□□□□□ -1.87
IGHV3-29-201ENST00000604817 STARD10Q9Y365 291 aa3.36□□□□□ -1.87
IGHV3-29-201ENST00000604817 PTGDR2Q9Y5Y4 395 aa3.36□□□□□ -1.87
IGHV3-29-201ENST00000604817 CLUHO75153 1309 aa3.36□□□□□ -1.87
IGHV3-29-201ENST00000604817 IGF2RP11717 2491 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 LAMA4Q16363 1823 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 AKAP13Q12802 2813 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 TDRD15B5MCY1 1934 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 URB1O60287 2271 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 LAMA1P25391 3075 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 IGLV9-49A0A0B4J1Y8 123 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 KLF18A0A0U1RQI7 1052 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 RPS10-NUDT3A0A1W2PQS6 291 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 E9PQ18 207 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 BCKDKO14874 412 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 CASKO14936 926 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 ZBTB5O15062 677 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 PFKFB2O60825 505 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 CBR3O75828 277 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 CDK2AP2O75956 126 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 PMS2P2O95744 297 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 ANGPTL1O95841 491 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 SYF2O95926 243 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 IGSF6O95976 241 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 F10P00742 488 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 CA1P00915 261 aaPredicted RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 IGHG3P01860 377 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 SERPINE2P07093 398 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 SP1P08047 785 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 UMPSP11172 480 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 PRPS2P11908 318 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 TDGF1P13385 188 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 MARK3P27448 753 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 HOXD3P31249 432 aaPredicted RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 BDKRB1P46663 353 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 RFX2P48378 723 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 SLC26A2P50443 739 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 NOVA1P51513 510 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 DCDC1P59894 354 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 SP4Q02446 784 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 POU3F1Q03052 451 aaPredicted RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 KLRB1Q12918 225 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 ZNF177Q13360 481 aaPredicted RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 RCAN2Q14206 197 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 NFATC4Q14934 902 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 RBMS2Q15434 407 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 CALCRLQ16602 461 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 LPAL2Q16609 132 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 ZNF260Q3ZCT1 412 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 Q4G0T1 1027 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 TP53I3Q53FA7 332 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 MTX3Q5HYI7 312 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 FGD3Q5JSP0 725 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 CLLU1OSQ5K130 101 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 SPANXN4Q5MJ08 99 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 DDI2Q5TDH0 399 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 RHBDF2Q6PJF5 856 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 PAQR6Q6TCH4 344 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 BTNL3Q6UXE8 466 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 HACD2Q6Y1H2 254 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 COLCA1Q6ZS62 124 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 Q6ZVQ6 151 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 FCRLAQ7L513 359 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 MFSD6LQ8IWD5 586 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 DND1Q8IYX4 353 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 GVQW1Q8N7I0 195 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 NANOGP1Q8N7R0 232 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 Q8N9G6 341 aaPredicted RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 Q8N9P0 234 aaPredicted RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 DMBX1Q8NFW5 382 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 OR4F17Q8NGA8 305 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 OR4F5Q8NH21 305 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 PDCD6IPQ8WUM4 868 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 RPL36ALQ969Q0 106 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 ASB9Q96DX5 294 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 OR4F4Q96R69 305 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 CPXM1Q96SM3 734 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 FMO2Q99518 471 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 TUBGCP2Q9BSJ2 902 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 FEM1AQ9BSK4 669 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 TMEM121Q9BTD3 319 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 BBS2Q9BXC9 721 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 ANKRD19PQ9H560 264 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 LY9Q9HBG7 655 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 NT5MQ9NPB1 228 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 DUS2Q9NX74 493 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 QPCTLQ9NXS2 382 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 MRPL39Q9NYK5 338 aaKnown RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 C19orf25Q9UFG5 118 aaPredicted RBP3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 CD300AQ9UGN4 299 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 IKZF2Q9UKS7 526 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 GINS2Q9Y248 185 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 FRMPD4Q14CM0 1322 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 IGSF10Q6WRI0 2623 aa3.35□□□□□ -1.87
IGHV3-29-201ENST00000604817 BPTFQ12830 3046 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 PI4KAP42356 2102 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ASCC3Q8N3C0 2202 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms