RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 ZNF583Q96ND8 569 aa11.22□□□□□ -0.61
TVP23B-204ENST00000571018 ARHGDIGQ99819 225 aa11.22□□□□□ -0.61
TVP23B-204ENST00000571018 SF3B5Q9BWJ5 86 aaKnown RBP11.22□□□□□ -0.61
TVP23B-204ENST00000571018 ACTR6Q9GZN1 396 aa11.22□□□□□ -0.61
TVP23B-204ENST00000571018 LIME1Q9H400 295 aa11.22□□□□□ -0.61
TVP23B-204ENST00000571018 PLEKHF2Q9H8W4 249 aa11.22□□□□□ -0.61
TVP23B-204ENST00000571018 TMEM27Q9HBJ8 222 aa11.22□□□□□ -0.61
TVP23B-204ENST00000571018 C6orf203Q9P0P8 240 aaPredicted RBP11.22□□□□□ -0.61
TVP23B-204ENST00000571018 FLVCR1Q9Y5Y0 555 aa11.22□□□□□ -0.61
TVP23B-204ENST00000571018 ABCA12Q86UK0 2595 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 A0A1W2PPR1 153 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 AQP7P3A6NL99 342 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 FTCDNL1E5RQL4 147 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 FMO6PO60774 539 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 FZD7O75084 574 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 MRPL33O75394 65 aaKnown RBP11.21□□□□□ -0.61
TVP23B-204ENST00000571018 AKR7A3O95154 331 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 AHSA1O95433 338 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 COX4I1P13073 169 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 LSP1P33241 339 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 CRYBA2P53672 197 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 OR1Q1Q15612 314 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 NRF1Q16656 503 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 FBXW9Q5XUX1 488 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 ERICH5Q6P6B1 374 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.21□□□□□ -0.61
TVP23B-204ENST00000571018 RANBP3LQ86VV4 465 aaPredicted RBP11.21□□□□□ -0.61
TVP23B-204ENST00000571018 POU5F2Q8N7G0 328 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 SLC26A7Q8TE54 656 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 RASSF5Q8WWW0 418 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 NINJ1Q92982 152 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 KISS1RQ969F8 398 aaPredicted RBP11.21□□□□□ -0.61
TVP23B-204ENST00000571018 APH1AQ96BI3 265 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 S100PBPQ96BU1 408 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 TAMM41Q96BW9 452 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 RCN3Q96D15 328 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 SLC47A1Q96FL8 570 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 PTDSS2Q9BVG9 487 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 ADPRHL2Q9NX46 363 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 ST6GALNAC2Q9UJ37 374 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 EDARQ9UNE0 448 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 SLC9A8Q9Y2E8 581 aa11.21□□□□□ -0.61
TVP23B-204ENST00000571018 MPDZO75970 2070 aa11.21□□□□□ -0.62
TVP23B-204ENST00000571018 ANKHD1Q8IWZ3 2542 aaKnown RBP11.2□□□□□ -0.62
TVP23B-204ENST00000571018 PDZD2O15018 2839 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 TEX15Q9BXT5 2789 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 IGKV1D-42A0A075B6H8 117 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 A0A087WUJ7 227 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 A0A0B4J2E0 115 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 A0A1B0GX12 115 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 GMNCA6NCL1 334 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 M0R3H8 397 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 KLF4O43474 513 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 OR2T1O43869 369 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 SNX3O60493 162 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 VAMP5O95183 116 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 COX5AP20674 150 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 CD247P20963 164 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 DRD4P21917 467 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 IL32P24001 234 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 RPS5P46782 204 aaKnown RBP11.2□□□□□ -0.62
TVP23B-204ENST00000571018 P2RY4P51582 365 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 TSC22D1Q15714 1073 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 TMEM225Q6GV28 225 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 TREML1Q86YW5 311 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 ZIC4Q8N9L1 334 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 OR6T1Q8NGN1 323 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 TMEM45BQ96B21 275 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 KTI12Q96EK9 354 aaPredicted RBP11.2□□□□□ -0.62
TVP23B-204ENST00000571018 PIK3IP1Q96FE7 263 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 MCHR1Q99705 422 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 NSRP1Q9H0G5 558 aaKnown RBP11.2□□□□□ -0.62
TVP23B-204ENST00000571018 MYLK2Q9H1R3 596 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 PARPBPQ9NWS1 579 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 SELENONQ9NZV5 590 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 ITGB1BP2Q9UKP3 347 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 USP22Q9UPT9 525 aa11.2□□□□□ -0.62
TVP23B-204ENST00000571018 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 FAM220BPB1ANY3 271 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 DYNC1I1O14576 645 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 AIM2O14862 343 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 IGHV3-9P01782 118 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 IGHV1-2P23083 117 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 LOXP28300 417 aaPredicted RBP11.19□□□□□ -0.62
TVP23B-204ENST00000571018 IST1P53990 364 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 GYS2P54840 703 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 CDH12P55289 794 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 TESK1Q15569 626 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 NPTX1Q15818 432 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 BEX5Q5H9J7 111 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 FAM69AQ5T7M9 428 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 ZNF613Q6PF04 617 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 PAMR1Q6UXH9 720 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 BHLHA15Q7RTS1 189 aaPredicted RBP11.19□□□□□ -0.62
TVP23B-204ENST00000571018 ARPINQ7Z6K5 226 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 SLC15A3Q8IY34 581 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 UBE2J2Q8N2K1 259 aa11.19□□□□□ -0.62
TVP23B-204ENST00000571018 OR9K2Q8NGE7 335 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms