RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TTKP33981 857 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 POLR2HP52434 150 aaKnown RBP11.55□□□□□ -0.56
SPG7-221ENST00000569720 MAP2K6P52564 334 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 DSCR9P59020 149 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 TGFBR3Q03167 851 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 KLF10Q13118 480 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 CLEC2AQ6UVW9 174 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 CASP12Q6UXS9 341 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 DNM1P46Q6ZS02 220 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 TRPM8Q7Z2W7 1104 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 RNF130Q86XS8 419 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 CCDC103Q8IW40 242 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 PCYOX1LQ8NBM8 494 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 WDR60Q8WVS4 1066 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 CNOT9Q92600 299 aaKnown RBP11.55□□□□□ -0.56
SPG7-221ENST00000569720 ZG16BQ96DA0 208 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 CCDC115Q96NT0 180 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 TRNT1Q96Q11 434 aaKnown RBP11.55□□□□□ -0.56
SPG7-221ENST00000569720 CACNG6Q9BXT2 260 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 CBLN4Q9NTU7 201 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 SLC9A8Q9Y2E8 581 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 TMED7Q9Y3B3 224 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 SLC25A15Q9Y619 301 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 ALPK2Q86TB3 2170 aa11.55□□□□□ -0.56
SPG7-221ENST00000569720 A0A1W2PR80 420 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 CLDN24A6NM45 220 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 E7EQL1 145 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 M0R1B8 84 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 PGRP06401 933 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 BMP4P12644 408 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 PTNP21246 168 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 CD40P25942 277 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 SLC1A3P43003 542 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 FABP6P51161 128 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 UFM1P61960 85 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 CYLC2Q14093 348 aaPredicted RBP11.54□□□□□ -0.56
SPG7-221ENST00000569720 RAB35Q15286 201 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 GABRA6Q16445 453 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 SYPL1Q16563 259 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 AGKQ53H12 422 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 C1QTNF12Q5T7M4 302 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 PODNL1Q6PEZ8 512 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 LRRC74BQ6ZQY2 392 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 HMGN2P46Q86SG4 172 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 MUC15Q8N387 334 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 MUS81Q96NY9 551 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 PANX1Q96RD7 426 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 MTHFD2LQ9H903 347 aaPredicted RBP11.54□□□□□ -0.56
SPG7-221ENST00000569720 FKRPQ9H9S5 495 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 NDE1Q9NXR1 346 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 AP3M1Q9Y2T2 418 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 AMDHD2Q9Y303 409 aa11.54□□□□□ -0.56
SPG7-221ENST00000569720 FBN3Q75N90 2809 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 TMEM72A0PK05 275 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 PRAMEF27A3QJZ7 478 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 CFAP73A6NFT4 308 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 AGAP5A6NIR3 686 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 A8MV72 311 aaPredicted RBP11.53□□□□□ -0.56
SPG7-221ENST00000569720 FAAHO00519 579 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 EBAG9O00559 213 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 DBIP07108 87 aaKnown RBP11.53□□□□□ -0.56
SPG7-221ENST00000569720 NR2F1P10589 423 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 TACR3P29371 465 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 RASSF2P50749 326 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 NME5P56597 212 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 H3F3AP84243 136 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 CHRNB3Q05901 458 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 HMBOX1Q6NT76 420 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 ZNF544Q6NX49 715 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 ZNF621Q6ZSS3 439 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 HIPK1Q86Z02 1210 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 ZNF440Q8IYI8 595 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 C17orf78Q8N4C9 275 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 DPP10Q8N608 796 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 ANKFN1Q8N957 763 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 C1orf162Q8NEQ5 155 aaPredicted RBP11.53□□□□□ -0.56
SPG7-221ENST00000569720 OR52E4Q8NGH9 312 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 SPDL1Q96EA4 605 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 ITCHQ96J02 903 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 OR52E6Q96RD3 313 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 INPP5KQ9BT40 448 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 SLC38A1Q9H2H9 487 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 EFCAB1Q9HAE3 211 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 GID8Q9NWU2 228 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 CCDC167Q9P0B6 97 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 LEF1Q9UJU2 399 aaPredicted RBP11.53□□□□□ -0.56
SPG7-221ENST00000569720 OSGIN1Q9UJX0 560 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 PRDM4Q9UKN5 801 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 FLVCR1Q9Y5Y0 555 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 GMEB1Q9Y692 573 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 ATP23Q9Y6H3 246 aa11.53□□□□□ -0.56
SPG7-221ENST00000569720 FBN1P35555 2871 aaKnown RBP11.53□□□□□ -0.56
SPG7-221ENST00000569720 AP3D1O14617 1153 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 ANGPT2O15123 496 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 KRT75O95678 551 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 WNT11O96014 354 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 GPIP06744 558 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 CHRM4P08173 479 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms