RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 ZNF541Q9H0D2 1346 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 CDRT15L2A8MXV6 281 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 MRPL3P09001 348 aaKnown RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 ITGB5P18084 799 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 RAB11AP62491 216 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 HOXC5Q00444 222 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OC90Q02509 493 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 PRICKLE2Q7Z3G6 844 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 NRMQ8IXM6 262 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 NLGN4XQ8N0W4 816 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 DTD2Q96FN9 168 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 UBXN10Q96LJ8 280 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 C1QTNF2Q9BXJ5 285 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ZNF552Q9H707 407 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 MYOTQ9UBF9 498 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 DSCR3O14972 297 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 PPP1R11O60927 126 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 SOX18P35713 384 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 RAD52P43351 418 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 CDKN2DP55273 166 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 CAV3P56539 151 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 SHC2P98077 582 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ENDOGQ14249 297 aaKnown RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 ARSIQ5FYB1 569 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 XKR7Q5GH72 579 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GPR142Q7Z601 462 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 SULF2Q8IWU5 870 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TP53I13Q8NBR0 393 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 FAM3CQ92520 227 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TEPSINQ96N21 525 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ZNF2Q9BSG1 426 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 TM7SF3Q9NS93 570 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 NWD2Q9ULI1 1742 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR52A4PA6NMU1 304 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 SOD1P00441 154 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 H2AFB1P0C5Y9 115 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TYRP1P17643 537 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TACR3P29371 465 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GSK3AP49840 483 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 RAB28P51157 221 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ELAVL2Q12926 359 aaKnown RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 PRAMEF19Q5SWL8 479 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 PLBD1Q6P4A8 553 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 LRRTM1Q86UE6 522 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 FAM160A2Q8N612 972 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 RASD2Q96D21 266 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 MS4A7Q9GZW8 240 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 UBQLN4Q9NRR5 601 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GNG13Q9P2W3 67 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GRHPRQ9UBQ7 328 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 HES2Q9Y543 173 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TRAV1-2A0A0B4J238 106 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR51F1A6NGY5 319 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 M0R082 166 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 MBTPS2O43462 519 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR8U8P0C7N1 319 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 SCAND1P57086 179 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ITPK1Q13572 414 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 UBE2V2Q15819 145 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR5M10Q6IEU7 315 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 FCRLAQ7L513 359 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR8U1Q8NH10 309 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ABHD4Q8TB40 342 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 OIT3Q8WWZ8 545 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ORAI1Q96D31 301 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TREX1Q9NSU2 369 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 TP53TG5Q9Y2B4 290 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 ZAR1LA6NP61 321 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 GSTZ1O43708 216 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 FZD6O60353 706 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 NDUFB6O95139 128 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 RGS7BPQ6MZT1 257 aaPredicted RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 RPUSD3Q6P087 351 aaKnown RBP5.84□□□□□ -1.47
CLK3-212ENST00000563418 OR5R1Q8NH85 324 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 HMGB4Q8WW32 186 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 FAM210BQ96KR6 192 aa5.84□□□□□ -1.47
CLK3-212ENST00000563418 MDFIC2A0A1B0GVS7 189 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 CLDN34H7C241 214 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 NUDT21O43809 227 aaKnown RBP5.84□□□□□ -1.48
CLK3-212ENST00000563418 MAS1P04201 325 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 PTHLHP12272 177 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 MYOGP15173 224 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 SULT1A1P50225 295 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 CCR8P51685 355 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 SCGB2A2Q13296 93 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 ENPP2Q13822 863 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 CEBPEQ15744 281 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 UGCGQ16739 394 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 PGGHGQ32M88 737 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 Q499Y3 187 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 GGTA1PQ4G0N0 100 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 NKAIN1Q4KMZ8 207 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 CPOQ8IVL8 374 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 ZNF563Q8TA94 476 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 CERKQ8TCT0 537 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 ARHGAP9Q9BRR9 750 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 SRMSQ9H3Y6 488 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 ELP3Q9H9T3 547 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 SUSD2Q9UGT4 822 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 GPR52Q9Y2T5 361 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms