RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 DCDP81605 110 aaKnown RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 HOXC5Q00444 222 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 RHAGQ02094 409 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 MVKQ03426 396 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 KLRB1Q12918 225 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 PMS2P3Q13401 168 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 FGFBP1Q14512 234 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 IL11RAQ14626 422 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 GINS1Q14691 196 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 RAB39AQ14964 217 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 OR1Q1Q15612 314 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 NKAIN1Q4KMZ8 207 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 CT45A2Q5DJT8 189 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 TOR2AQ5JU69 321 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 PDZK1Q5T2W1 519 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 PRAMEF17Q5VTA0 474 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 MEDAGQ5VYS4 303 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 C12orf73Q69YU5 71 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 NPSR1Q6W5P4 371 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 Q6ZPB1 254 aaPredicted RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SLC29A4Q7RTT9 530 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 TMPRSS9Q7Z410 1059 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 CLVS1Q8IUQ0 354 aaPredicted RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 CCDC71Q8IV32 467 aaPredicted RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 CYP4Z2PQ8N1L4 340 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 BCORP1Q8N888 145 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 OR4N2Q8NGD1 307 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF420Q8TAQ5 688 aaPredicted RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 TEX47Q8TBZ9 253 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 STT3BQ8TCJ2 826 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SLC2A12Q8TD20 617 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF721Q8TF20 911 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 METTL21AQ8WXB1 218 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 RORBQ92753 470 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 OSTF1Q92882 214 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 TSLPQ969D9 159 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 UBE2FQ969M7 185 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 TMIGD2Q96BF3 282 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 NMD3Q96D46 503 aaKnown RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 MPP4Q96JB8 637 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 LCORQ96JN0 433 aaPredicted RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SLC38A2Q96QD8 506 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 COPS4Q9BT78 406 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 RBM38Q9H0Z9 239 aaKnown RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SLC25A19Q9HC21 320 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 DLL4Q9NR61 685 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 UBQLN4Q9NRR5 601 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ERVK13-1Q9NX77 482 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF226Q9NYT6 803 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 AKAP7Q9P0M2 348 aaPredicted RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 DUSP13Q9UII6 198 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 KCNE5Q9UJ90 142 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SLC7A7Q9UM01 511 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM5Q9Y2B1 443 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SLC35A3Q9Y2D2 325 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 PCDHGB1Q9Y5G3 927 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ATP23Q9Y6H3 246 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SEC16AO15027 2179 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 IGLV3-12A0A075B6K2 115 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CENPVL1A0A0U1RR11 272 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 IRGMA1A4Y4 181 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 FRG2CA6NGY1 282 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 UNC119BA6NIH7 251 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CLDN24A6NM45 220 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CLCA1A8K7I4 914 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 EFCAB7A8K855 629 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 C22orf46C9J442 243 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 NPIPB9F8W1W9 429 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 H3BML4 177 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 GTPBP1O00178 669 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 REM1O75628 298 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 TRMUO75648 421 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 SEC14L2O76054 403 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 SOX14O95416 240 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CSTAP01040 98 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 IGKV1D-16P01601 117 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CLPSP04118 112 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 IGKV3-11P04433 115 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 KLK3P07288 261 aaPredicted RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 GP1BAP07359 652 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CYC1P08574 325 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 ZGLP1P0C6A0 271 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 GKN3PP0CG01 181 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 FGF5P12034 268 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 GABRB1P18505 474 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CD53P19397 219 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 FPR3P25089 353 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 FPR2P25090 351 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 ADMP35318 185 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 OMPP47874 163 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 EMP2P54851 167 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 TMBIM6P55061 237 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 COPZ1P61923 177 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 EMX1Q04741 257 aaPredicted RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 PIGFQ07326 219 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 SMN1Q16637 294 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 NKPD1Q17RQ9 610 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 C3orf38Q5JPI3 329 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM236Q5W0B7 351 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms