RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 BCL2L10Q9HD36 194 aa14□□□□□ -0.17
CDK4-215ENST00000553237 ZNF701Q9NV72 531 aaPredicted RBP14□□□□□ -0.17
CDK4-215ENST00000553237 ADPRHL2Q9NX46 363 aa14□□□□□ -0.17
CDK4-215ENST00000553237 VAPAQ9P0L0 249 aa14□□□□□ -0.17
CDK4-215ENST00000553237 UPB1Q9UBR1 384 aa14□□□□□ -0.17
CDK4-215ENST00000553237 CADP27708 2225 aa14□□□□□ -0.17
CDK4-215ENST00000553237 A0A1W2PP18 115 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 A8MVM7 634 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 ITGA5P08648 1049 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 BMP2P12643 396 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 ZNF83P51522 516 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 ARFIP2P53365 341 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 RPS4XP62701 263 aaKnown RBP13.99□□□□□ -0.17
CDK4-215ENST00000553237 LTBQ06643 244 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 LRIF1Q5T3J3 769 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 GCNT6Q5T4J0 391 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 TSPO2Q5TGU0 170 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 GPAT4Q86UL3 456 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 P2RY8Q86VZ1 359 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 BBS10Q8TAM1 723 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 C3orf49Q96BT1 292 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 TAPBPLQ9BX59 468 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 C1QTNF6Q9BXI9 259 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 RSPO3Q9BXY4 272 aaPredicted RBP13.99□□□□□ -0.17
CDK4-215ENST00000553237 TRIM2Q9C040 744 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 SLC7A10Q9NS82 523 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 PARPBPQ9NWS1 579 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 TAS2R16Q9NYV7 291 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 MALT1Q9UDY8 824 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 SLC9A8Q9Y2E8 581 aa13.99□□□□□ -0.17
CDK4-215ENST00000553237 NIPBLQ6KC79 2804 aaeCLIP13.98□□□□□ -0.17
CDK4-215ENST00000553237 ABCD4O14678 606 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 LY6G6DO95868 133 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 DANCRP0C864 163 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 PAX1P15863 534 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 GABRA6Q16445 453 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 C1orf140Q5VVS0 124 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 PRAMEF8Q5VWM4 474 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 PRAMEF7Q5VXH5 474 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 TMEM225Q6GV28 225 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 ZIC4Q8N9L1 334 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 OR9K2Q8NGE7 335 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 GTPBP3Q969Y2 492 aaKnown RBP13.98□□□□□ -0.17
CDK4-215ENST00000553237 COX4I2Q96KJ9 171 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 ZNF385AQ96PM9 386 aaKnown RBP13.98□□□□□ -0.17
CDK4-215ENST00000553237 IKZF5Q9H5V7 419 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 CISD1Q9NZ45 108 aaKnown RBP13.98□□□□□ -0.17
CDK4-215ENST00000553237 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.98□□□□□ -0.17
CDK4-215ENST00000553237 MAGED1Q9Y5V3 778 aaPredicted RBP13.98□□□□□ -0.17
CDK4-215ENST00000553237 SLC25A15Q9Y619 301 aa13.98□□□□□ -0.17
CDK4-215ENST00000553237 AQP7P3A6NL99 342 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 SHISA9B4DS77 424 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 ARAFP10398 606 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 PTNP21246 168 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 CDKN1AP38936 164 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 CDK6Q00534 326 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 AAED1Q7RTV5 226 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
CDK4-215ENST00000553237 SLC25A36Q96CQ1 311 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 MUS81Q96NY9 551 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 SF3B5Q9BWJ5 86 aaKnown RBP13.97□□□□□ -0.17
CDK4-215ENST00000553237 PRR14Q9BWN1 585 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 LEF1Q9UJU2 399 aaPredicted RBP13.97□□□□□ -0.17
CDK4-215ENST00000553237 PRDM4Q9UKN5 801 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 NDUFAF1Q9Y375 327 aa13.97□□□□□ -0.17
CDK4-215ENST00000553237 NAV3Q8IVL0 2385 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 TRBV5-3A0A0A0MS03 114 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 TMEM229AB2RXF0 380 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 M0R1B8 84 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 OVOL3O00110 214 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 PDLIM1O00151 329 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 TPST1O60507 370 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 TMCC2O75069 709 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 NPIPB7O75200 414 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 ETS2P15036 469 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 CDH2P19022 906 aaPredicted RBP13.96□□□□□ -0.17
CDK4-215ENST00000553237 PPIBP23284 216 aaKnown RBP13.96□□□□□ -0.17
CDK4-215ENST00000553237 P2RY4P51582 365 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 CDH11P55287 796 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 SPOCK1Q08629 439 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 PGGHGQ32M88 737 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 OR7E24Q6IFN5 339 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 REEP3Q6NUK4 255 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 DLEU7Q6UYE1 221 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 SSX8Q7RTT4 187 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 COMTD1Q86VU5 262 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 KDM8Q8N371 416 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 WDR31Q8NA23 367 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 STK35Q8TDR2 534 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 TMEM45BQ96B21 275 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 TRMT61AQ96FX7 289 aaKnown RBP13.96□□□□□ -0.17
CDK4-215ENST00000553237 ZNF317Q96PQ6 595 aaPredicted RBP13.96□□□□□ -0.17
CDK4-215ENST00000553237 RPS6KB2Q9UBS0 482 aa13.96□□□□□ -0.17
CDK4-215ENST00000553237 ELOA3DA6NLF2 546 aaPredicted RBP13.95□□□□□ -0.18
CDK4-215ENST00000553237 EVPLLA8MZ36 301 aa13.95□□□□□ -0.18
CDK4-215ENST00000553237 ANGPT2O15123 496 aa13.95□□□□□ -0.18
CDK4-215ENST00000553237 AHSA1O95433 338 aa13.95□□□□□ -0.18
CDK4-215ENST00000553237 CD40P25942 277 aa13.95□□□□□ -0.18
CDK4-215ENST00000553237 AQP1P29972 269 aa13.95□□□□□ -0.18
CDK4-215ENST00000553237 PRKAR1BP31321 381 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms