RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 KLHL1Q9NR64 748 aa12.78□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC6A5Q9Y345 797 aa12.78□□□□□ -0.36
RAB3IP-216ENST00000552199 SHISA3A0PJX4 238 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 PTTG1O95997 202 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 TFP02787 698 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 OR2T7P0C7T2 308 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 ASAH2BP0C7U1 165 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 DIO1P49895 249 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 FOXL2P58012 376 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 OR12D2P58182 307 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 PON3Q15166 354 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 SLC35D3Q5M8T2 416 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 DDI2Q5TDH0 399 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 AGAP7PQ5VUJ5 663 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 SSX6Q7RTT6 188 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 ANKRD37Q7Z713 158 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 DEFB123Q8N688 67 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 OR51L1Q8NGJ5 315 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 OR2T27Q8NH04 317 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 EDAQ92838 391 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 CNN2Q99439 309 aaKnown RBP12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 NEURL2Q9BR09 285 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 CPNE5Q9HCH3 593 aa12.77□□□□□ -0.37
RAB3IP-216ENST00000552199 IGHV3-20A0A0C4DH32 117 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 OR6C68A6NDL8 312 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 AGRPO00253 132 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 IMPA2O14732 288 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 FADS1O60427 444 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 SCRG1O75711 98 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 CD14P08571 375 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 APEHP13798 732 aaKnown RBP12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 SPI1P17947 270 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ITPKBP27987 946 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 UQCRC1P31930 480 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 HCCSP53701 268 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 RNF4P78317 190 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 E2F1Q01094 437 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 KRR1Q13601 381 aaKnown RBP12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 TRAM1Q15629 374 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 TOMM34Q15785 309 aaPredicted RBP12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 PWWP2BQ6NUJ5 590 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ARL9Q6T311 187 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 SLC35F2Q8IXU6 374 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ZPLD1Q8TCW7 415 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ZNRF4Q8WWF5 429 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 TP53INP1Q96A56 240 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 DEPDC7Q96QD5 511 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 SEMA4CQ9C0C4 833 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 KCNN2Q9H2S1 579 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 C14orf119Q9NWQ9 140 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 RARRES3Q9UL19 164 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 PCDHGB7Q9Y5F8 929 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 TEX13CA0A0J9YWL9 993 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 C17orf51A8MQB3 221 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 IDSB3KWA1 339 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 DVL2O14641 736 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 KHNYNO15037 678 aaKnown RBP12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 GMFGO60234 142 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 HEXBP07686 556 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 PGCP20142 388 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 F8A1P23610 371 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 CDKN2AP42771 156 aaKnown RBP12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 DEFA1P59665 94 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 DEFA3P59666 94 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 CTXN1P60606 82 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 IL10RAQ13651 578 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ZNF79Q15937 498 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 GLYR1Q49A26 553 aaPredicted RBP12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ALG10Q5BKT4 473 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ZMAT1Q5H9K5 638 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 FAM122BQ7Z309 247 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 OR8H2Q8N162 312 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 RFLNBQ8N5W9 214 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 EID2Q8N6I1 236 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 NFAM1Q8NET5 270 aaPredicted RBP12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 TAAR8Q969N4 342 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 CCDC74BQ96LY2 380 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 Q96M85 177 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 LPAR4Q99677 370 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ATF6BQ99941 703 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 SRRQ9GZT4 340 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 GAREM1Q9H706 876 aa12.76□□□□□ -0.37
RAB3IP-216ENST00000552199 ADAMTS9Q9P2N4 1935 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 OR6C70A6NIJ9 312 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 YKT6O15498 198 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 CDC40O60508 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 NCR1O76036 304 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 TXNDC12O95881 172 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 CFIP05156 583 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 GP1BBP13224 206 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 CXCR1P25024 350 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 NAA10P41227 235 aaPredicted RBP12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 MTNR1BP49286 362 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 DCDP81605 110 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 ZXDAP98168 799 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 SLC3A1Q07837 685 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 DMKNQ6E0U4 476 aaPredicted RBP12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 LEG1Q6P5S2 330 aa12.75□□□□□ -0.37
RAB3IP-216ENST00000552199 XKRXQ6PP77 449 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms