RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FAM122CQ6P4D5 195 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 LINC00114Q6XXX2 140 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SLC35F3Q8IY50 421 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 MOSPD2Q8NHP6 518 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 GRHL3Q8TE85 626 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SCARB1Q8WTV0 552 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SMAP2Q8WU79 429 aaPredicted RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 POF1BQ8WVV4 589 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 HOXB13Q92826 284 aaPredicted RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 MIB2Q96AX9 1013 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SLC22A18Q96BI1 424 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 HAVCR1Q96D42 359 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 ADAP2Q9NPF8 381 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 TAS2R10Q9NYW0 307 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 FLRT3Q9NZU0 649 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 USP36Q9P275 1121 aaKnown RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 PCDH10Q9P2E7 1040 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 ZNF69Q9UC07 566 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 ENTPD2Q9Y5L3 495 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 V9GY05 133 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 FANCMQ8IYD8 2048 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 MCRIP1C9JLW8 97 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 RP2O75695 350 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 ADH1BP00325 375 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 HIST1H1CP16403 213 aaKnown RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 MAPK3P27361 379 aaPredicted RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 S100A11P31949 105 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 FAUP35544 74 aaKnown RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 P2RX1P51575 399 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 DLX5P56178 289 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SIM1P81133 766 aaPredicted RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 HES5Q5TA89 166 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SLC6A19Q695T7 634 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 RGS7BPQ6MZT1 257 aaPredicted RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 MTFR2Q6P444 385 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 LRRN1Q6UXK5 716 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 ABHD13Q7L211 337 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 KANSL1Q7Z3B3 1105 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SDR9C7Q8NEX9 313 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 PCNPQ8WW12 178 aaKnown RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 CNOT9Q92600 299 aaKnown RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 RBM18Q96H35 190 aaKnown RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 KLHL15Q96M94 604 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 PDCD1LG2Q9BQ51 273 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SEC22CQ9BRL7 303 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 CHIAQ9BZP6 476 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SLITRK2Q9H156 845 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 CDCP1Q9H5V8 836 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 CA10Q9NS85 328 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 PFDN2Q9UHV9 154 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 INSL6Q9Y581 213 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 SPACA6W5XKT8 324 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 NPIPA5A0A0B4J1W7 369 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 A8MXK9 166 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 NPIPA7E9PJI5 369 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 NKX2-2O95096 273 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 HRGP04196 525 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 HIST1H2ABP04908 130 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 NMBP08949 121 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 NPIPA8P0DM63 369 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 PPP3CBP16298 524 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 EPCAMP16422 314 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 NAA10P41227 235 aaPredicted RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 MAP2K6P52564 334 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 SEC61A1P61619 476 aaKnown RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 STX4Q12846 297 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 RUNX2Q13950 521 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 CST6Q15828 149 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 LINC00303Q3SY05 128 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 TMEM81Q6P7N7 255 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 DPY19L2P2Q6ZN68 376 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 FCRLAQ7L513 359 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 HIST3H2AQ7L7L0 130 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 SFTPA1Q8IWL2 248 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 ARL14Q8N4G2 192 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 DNAAF1Q8NEP3 725 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 OR4K13Q8NH42 304 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 C1orf216Q8TAB5 229 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 SYNPRQ8TBG9 265 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 LCN9Q8WX39 176 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 HIST1H2ACQ93077 130 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 PNPLA2Q96AD5 504 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 SCARF2Q96GP6 870 aaPredicted RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 TTTY10Q9BZA0 68 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 NMNAT2Q9BZQ4 307 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 SHARPINQ9H0F6 387 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 RSPH9Q9H1X1 276 aaPredicted RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 POT1Q9NUX5 634 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 FBXO34Q9NWN3 711 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 MRPL15Q9P015 296 aaKnown RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 PLEKHM1Q9Y4G2 1056 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 UBE2QL1A1L167 161 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 OTOL1A6NHN0 477 aaPredicted RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 ARPC3O15145 178 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 TNFSF14O43557 240 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 SUSD5O60279 629 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 PPM1BO75688 479 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 NGFRP08138 427 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms