RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 FAM183AA6NL82 134 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SYT5O00445 386 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 CR2P20023 1033 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 CHATP28329 748 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 HTR1FP30939 366 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 THBS3P49746 956 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ERVFC1P60507 584 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MLF2Q15773 248 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 CCNJQ5T5M9 372 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SLCO4C1Q6ZQN7 724 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 BPHLQ86WA6 291 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 GRAMD2AQ8IUY3 354 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 FBXO27Q8NI29 283 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PHYHIPQ92561 330 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 EDAQ92838 391 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 S100PBPQ96BU1 408 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 KCNJ16Q9NPI9 418 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 C1orf123Q9NWV4 160 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PISDQ9UG56 409 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 A0A1B0GTW7 788 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF593O00488 134 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 GPR39O43194 453 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 LILRB5O75023 590 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 GJB3O75712 270 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PVRP15151 417 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 CPT2P23786 658 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PLK5Q496M5 336 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF585AQ6P3V2 769 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MIB2Q96AX9 1013 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MACROD1Q9BQ69 325 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PIGQQ9BRB3 760 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OBP2BQ9NPH6 170 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 EHFQ9NZC4 300 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ATG4BQ9Y4P1 393 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 TMEM184BQ9Y519 407 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 TIMM8BQ9Y5J9 83 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 A0A0U1RQS6 177 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MCRIP1C9JLW8 97 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NUDT21O43809 227 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SPDEFO95238 335 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 GYPBP06028 91 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 FBXO45P0C2W1 286 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 GPR19Q15760 415 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 PGBD5Q8N414 524 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 LRRC18Q8N456 261 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 RNF175Q8N4F7 328 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR14A2Q96R54 314 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NKX3-1Q99801 234 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR51B6Q9H340 312 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 B3GAT1Q9P2W7 334 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NOSIPQ9Y314 301 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 TRIP12Q14669 1992 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 ENPP1P22413 925 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR1D4P47884 311 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NXNL2Q5VZ03 156 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 APOOLQ6UXV4 268 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MEX3DQ86XN8 651 aaKnown RBP6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OR51D1Q8NGF3 324 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 TM4SF18Q96CE8 201 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 STACQ99469 402 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NIPAL2Q9H841 368 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 NOX3Q9HBY0 568 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 OLAHQ9NV23 265 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 EMC9Q9Y3B6 208 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 SCN9AQ15858 1988 aa6.03□□□□□ -1.44
LSAMP-207ENST00000539563 MEIOCA2RUB1 952 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 A6NHS1 94 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 HOXC11O43248 304 aaPredicted RBP6.02□□□□□ -1.44
LSAMP-207ENST00000539563 GABRA2P47869 451 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF529Q6P280 563 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 FAM57BQ71RH2 274 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 RDH10Q8IZV5 341 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 OR13C2Q8NGS9 318 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 KATNB1Q9BVA0 655 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 MCOLN1Q9GZU1 580 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 MFFQ9GZY8 342 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 MMP28Q9H239 520 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 STEAP1Q9UHE8 339 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 PCDHB10Q9UN67 800 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 CEPT1Q9Y6K0 416 aa6.02□□□□□ -1.44
LSAMP-207ENST00000539563 TRBV4-1A0A0J9YWV2 114 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 OR6C6A6NF89 314 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 FAM155AB1AL88 458 aaPredicted RBP6.02□□□□□ -1.45
LSAMP-207ENST00000539563 H7C1Q1 480 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 ARPC1BO15143 372 aaKnown RBP6.02□□□□□ -1.45
LSAMP-207ENST00000539563 SSX4O60224 188 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 SCG5P05408 212 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 NFYAP23511 347 aaPredicted RBP6.02□□□□□ -1.45
LSAMP-207ENST00000539563 RAP2BP61225 183 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 POU3F1Q03052 451 aaPredicted RBP6.02□□□□□ -1.45
LSAMP-207ENST00000539563 MFGE8Q08431 387 aaPredicted RBP6.02□□□□□ -1.45
LSAMP-207ENST00000539563 WDR88Q6ZMY6 472 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 STK35Q8TDR2 534 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 DUSP19Q8WTR2 217 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 TCTEX1D2Q8WW35 142 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 MARCH5Q9NX47 278 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 KCND3Q9UK17 655 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 EDARQ9UNE0 448 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 ATAD5Q96QE3 1844 aa6.02□□□□□ -1.45
LSAMP-207ENST00000539563 ZNFX1Q9P2E3 1918 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms