RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PCDHGB7Q9Y5F8 929 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 PRUNE2Q8WUY3 3088 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 TRAV1-2A0A0B4J238 106 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 A0A1B0GVT2 93 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 J3QLW9 94 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 ANKRD34CP0C6C1 535 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 ZNF19P17023 458 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 SLC16A1P53985 500 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 LTBQ06643 244 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 PRAMEF17Q5VTA0 474 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 SPATC1Q76KD6 591 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 AKAP14Q86UN6 197 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 RDH10Q8IZV5 341 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 NLGN4YQ8NFZ3 816 aaPredicted RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 DAZLQ92904 295 aaKnown RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 RNF166Q96A37 237 aaPredicted RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 PELI1Q96FA3 418 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 ZC3HAV1LQ96H79 300 aaKnown RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 MOGAT1Q96PD6 335 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 NMNAT3Q96T66 252 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 SLC22A4Q9H015 551 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 B3GAT2Q9NPZ5 323 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 SACM1LQ9NTJ5 587 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 MPDZO75970 2070 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 PLA2G10O15496 165 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 EIF4E2O60573 245 aaKnown RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 GLCEO94923 617 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 CD14P08571 375 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 ALAS2P22557 587 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 ARL4DP49703 201 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 RPS11P62280 158 aaKnown RBP eCLIP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 DMWDQ09019 674 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 CBX3Q13185 183 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 EMC4Q5J8M3 183 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 MAMSTRQ6ZN01 415 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 GPR135Q8IZ08 494 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 SMAP2Q8WU79 429 aaPredicted RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 RASD2Q96D21 266 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 NEDD4LQ96PU5 975 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 DEPDC7Q96QD5 511 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 KCNJ15Q99712 375 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 IER2Q9BTL4 223 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 INIPQ9NRY2 104 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 COMMD3Q9UBI1 195 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 ADAM30Q9UKF2 790 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 ADAMTS9Q9P2N4 1935 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 A8MUA0 341 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 TMCC2O75069 709 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 IMPDH2P12268 514 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 SDHAP31040 664 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 RPL4P36578 427 aaKnown RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 RPS5P46782 204 aaKnown RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 CXCL12P48061 93 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 EIF2B2P49770 351 aaKnown RBP8.48□□□□□ -1.05
UBE3B-207ENST00000537063 PON3Q15166 354 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 RPTNQ6XPR3 784 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 CYSLTR2Q9NS75 346 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 NCDNQ9UBB6 729 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 COPS3Q9UNS2 423 aa8.48□□□□□ -1.05
UBE3B-207ENST00000537063 LY6G6EA0A0G2JKS1 128 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 CDC40O60508 579 aaKnown RBP eCLIP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 BGLAPP02818 100 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 FAM157BP0CG42 384 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 HPGDP15428 266 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SHC1P29353 583 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 HOXA6P31267 233 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 GRK6P43250 576 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 PNLIPRP2P54317 469 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 ERVK-25P63136 954 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 GXYLT1Q4G148 440 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 VWA2Q5GFL6 755 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 PAMR1Q6UXH9 720 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 UNQ9370/PRO34162Q6UXP9 181 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 ADOQ96SZ5 270 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 ELF4Q99607 663 aaPredicted RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 LPAR4Q99677 370 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SEMA4CQ9C0C4 833 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 C11orf54Q9H0W9 315 aaPredicted RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 FKRPQ9H9S5 495 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SLC22A11Q9NSA0 550 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 MOKQ9UQ07 419 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 U3KQA8 63 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 TEX13CA0A0J9YWL9 993 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 FADS1O60427 444 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 ONECUT2O95948 504 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 SERPINA3P01011 423 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 UCHL1P09936 223 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 APEX1P27695 318 aaKnown RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 PYCR1P32322 319 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 AQP2P41181 271 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 CDKN2AP42771 156 aaKnown RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 HTR3AP46098 478 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 PPM1FP49593 454 aaPredicted RBP8.47□□□□□ -1.05
UBE3B-207ENST00000537063 HCCSP53701 268 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 TPTEP56180 551 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 ZP2Q05996 745 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 P2RY14Q15391 338 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 TP53I3Q53FA7 332 aa8.47□□□□□ -1.05
UBE3B-207ENST00000537063 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms