RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CIDECQ96AQ7 238 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 TMEM45BQ96B21 275 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 MS4A4EQ96PG1 132 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ALKBH3Q96Q83 286 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 CCDC106Q9BWC9 280 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 MS4A7Q9GZW8 240 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 HOXD1Q9GZZ0 328 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 TCF7L1Q9HCS4 588 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 CTPS2Q9NRF8 586 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 TNFRSF19Q9NS68 423 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ACER3Q9NUN7 267 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 CHRNA9Q9UGM1 479 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 LEF1Q9UJU2 399 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 FZR1Q9UM11 496 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 HDGFL3Q9Y3E1 203 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 DTNAQ9Y4J8 743 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 AUP1Q9Y679 476 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 CACNG2Q9Y698 323 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 PPIAL4EA0A075B759 164 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 A0A096LPK6 155 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 PPIAL4CA0A0B4J2A2 164 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF587BE7ETH6 402 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 PPIAL4DF5H284 164 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ST8SIA5O15466 376 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ULK1O75385 1050 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 KRT33AO76009 404 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 SEC31AO94979 1220 aaKnown RBP7.03□□□□□ -1.28
CLIP1-206ENST00000535290 NDUFA7O95182 113 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 HSPA4LO95757 839 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 KRT6AP02538 564 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 KRT6BP04259 564 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 CRYBA1P05813 215 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 PPIAL4FP0DN26 164 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 IGHV4-38-2P0DP08 117 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 UBL4AP11441 157 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 IMPDH2P12268 514 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 BCKDHAP12694 445 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 CCNA2P20248 432 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 GSTM5P46439 218 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 MTNR1AP48039 350 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 KRT6CP48668 564 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 CCL8P80075 99 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF154Q13106 437 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 SKP2Q13309 424 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ALKBH6Q3KRA9 238 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 RUSC1-AS1Q66K80 236 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 KLC3Q6P597 504 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 FIP1L1Q6UN15 594 aaKnown RBP7.03□□□□□ -1.28
CLIP1-206ENST00000535290 C3orf62Q6ZUJ4 267 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 CYS1Q717R9 158 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ABHD12BQ7Z5M8 362 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-206ENST00000535290 MDP1Q86V88 176 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ADGRG3Q86Y34 549 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 OR9K2Q8NGE7 335 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 CHMP6Q96FZ7 201 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 PBKQ96KB5 322 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF317Q96PQ6 595 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-206ENST00000535290 LAT2Q9GZY6 243 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF385DQ9H6B1 395 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 DUSP22Q9NRW4 184 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 SIRT5Q9NXA8 310 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 TMEM181Q9P2C4 612 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 PURGQ9UJV8 347 aaKnown RBP7.03□□□□□ -1.28
CLIP1-206ENST00000535290 RNF114Q9Y508 228 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 KCNE3Q9Y6H6 103 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 TENM2Q9NT68 2774 aa7.03□□□□□ -1.28
CLIP1-206ENST00000535290 CENPVL1A0A0U1RR11 272 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 FAM187AA6NFU0 413 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 TRAPPC2LH3BP13 241 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 TRAF3IP2O43734 574 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 BCAS1O75363 584 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 UPK3AO75631 287 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 RSL1D1O76021 490 aaKnown RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 CLPXO76031 633 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 HMGN2P05204 90 aaKnown RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 GLRXP35754 106 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 ARR3P36575 388 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 HSD17B3P37058 310 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 APOBEC1P41238 236 aaKnown RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 CRYBB2P43320 205 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 SELENOPP49908 381 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 PROK1P58294 105 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 SLC35A1P78382 337 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 ARF1P84077 181 aaKnown RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 LASP1Q14847 261 aaKnown RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF385BQ569K4 471 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 PDZK1Q5T2W1 519 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 MROH9Q5TGP6 573 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 ZCCHC12Q6PEW1 402 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 PAQR6Q6TCH4 344 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 LINC01006Q8NI28 216 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 TMEM234Q8WY98 164 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 EGLN2Q96KS0 407 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 STACQ99469 402 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 GAL3ST1Q99999 423 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 TRIM31Q9BZY9 425 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 KCNF1Q9H3M0 494 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 PIGUQ9H490 435 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 MOV10Q9HCE1 1003 aaKnown RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms