RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PRAMEF20Q5VT98 475 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 ZNF709Q8N972 641 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 BEST4Q8NFU0 473 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 A0A1B0GTW7 788 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 TCRBV5S2A0A599 114 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 EFCAB7A8K855 629 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 SLC33A1O00400 549 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-205ENST00000533464 FZD7O75084 574 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 DCNP07585 359 aaKnown RBP16.26■□□□□ 0.19
PHRF1-205ENST00000533464 CD27P26842 260 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 POLR2HP52434 150 aaKnown RBP16.26■□□□□ 0.19
PHRF1-205ENST00000533464 LTBQ06643 244 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 CTU2Q2VPK5 515 aaKnown RBP16.26■□□□□ 0.19
PHRF1-205ENST00000533464 FAM219BQ5XKK7 198 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 PAPD4Q6PIY7 484 aaKnown RBP16.26■□□□□ 0.19
PHRF1-205ENST00000533464 SCGB1C1Q8TD33 95 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 MBOAT4Q96T53 435 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 SYT3Q9BQG1 590 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 RCE1Q9Y256 329 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 ZNF175Q9Y473 711 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 HLA-DMAP28067 261 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 TRHRP34981 398 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-205ENST00000533464 FXYD4P59646 89 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 CCL4L1Q8NHW4 92 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 SLC41A2Q96JW4 573 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 C19orf43Q9BQ61 176 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 NRSN2Q9GZP1 204 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 DUSP22Q9NRW4 184 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 MOKQ9UQ07 419 aa16.26■□□□□ 0.19
PHRF1-205ENST00000533464 APOC3P02656 99 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 POU3F2P20265 443 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 CXADRP78310 365 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 DCDP81605 110 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 STEAP3Q658P3 488 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 MRPL21Q7Z2W9 205 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 CLDN22Q8N7P3 220 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ZNF511Q8NB15 262 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ABHD4Q8TB40 342 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 KCTD12Q96CX2 325 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 C7orf50Q9BRJ6 194 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ULBP3Q9BZM4 244 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 CHST8Q9H2A9 424 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ATP13A2Q9NQ11 1180 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 PCDH10Q9P2E7 1040 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 NDRG4Q9ULP0 352 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 BRWD1Q9NSI6 2320 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 A0A087WUU8 490 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 FAM230AA0A1W2PPH8 454 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 SIGLEC6O43699 453 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 CER1O95813 267 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 WDPCPO95876 746 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 SNRPGP62308 76 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ZMYND11Q15326 602 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 PDZD9Q8IXQ8 264 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 OR10A2Q9H208 303 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 REV1Q9UBZ9 1251 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 MMACHCQ9Y4U1 282 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ASCC3Q8N3C0 2202 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 APEX1P27695 318 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 HBMQ6B0K9 141 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 NDUFAF7Q7L592 441 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ARL14Q8N4G2 192 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 SNIP1Q8TAD8 396 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 NANOS1Q8WY41 292 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 EDAQ92838 391 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ULBP2Q9BZM5 246 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 CDH20Q9HBT6 801 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 MMP17Q9ULZ9 603 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 SLC6A14Q9UN76 642 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 NUDT21O43809 227 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ADH6P28332 368 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ZNF767PQ75MW2 155 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ZNF775Q96BV0 537 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 SDF2Q99470 211 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ZNF226Q9NYT6 803 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 ACAD8Q9UKU7 415 aa16.25■□□□□ 0.19
PHRF1-205ENST00000533464 MCTS1Q9ULC4 181 aaKnown RBP16.25■□□□□ 0.19
PHRF1-205ENST00000533464 RAB40ALP0C0E4 278 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 HTR2AP28223 471 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 RGS19P49795 217 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 MECP2P51608 486 aaKnown RBP16.24■□□□□ 0.19
PHRF1-205ENST00000533464 ZSCAN1Q8NBB4 408 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 CHPT1Q8WUD6 406 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 RAB40AQ8WXH6 277 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 SLC35A4Q96G79 324 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 POU2F3Q9UKI9 436 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 C19orf53Q9UNZ5 99 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-205ENST00000533464 TMED7-TICAM2A0A0A6YYA0 188 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 F5H5P2 479 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 H3BUI4 141 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 CLEC2LP0C7M8 214 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 ECH1Q13011 328 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 TMEM106AQ96A25 262 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 TSNAXQ99598 290 aaKnown RBP16.24■□□□□ 0.19
PHRF1-205ENST00000533464 NOX3Q9HBY0 568 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 PRDM9Q9NQV7 894 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 TMED7Q9Y3B3 224 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 COL4A1P02462 1669 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 CACNA1CQ13936 2221 aa16.24■□□□□ 0.19
PHRF1-205ENST00000533464 CD14P08571 375 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms