RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 IFNW1P05000 195 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 THBS1P07996 1170 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 PPP3CBP16298 524 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 IL7RP16871 459 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 PRKAR1BP31321 381 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 CCKARP32238 428 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 KRT20P35900 424 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 PTDSS1P48651 473 aaKnown RBP10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 PSMD4P55036 377 aaKnown RBP10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 PSPHP78330 225 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 PLCXD2Q0VAA5 305 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 TRIP10Q15642 601 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF141Q15928 474 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 LPCAT4Q643R3 524 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 TIGD3Q6B0B8 471 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF836Q6ZNA1 936 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 DNM1P46Q6ZS02 220 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 RBM45Q8IUH3 476 aaKnown RBP10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 CNEP1R1Q8N9A8 125 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 OR4D11Q8NGI4 311 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 VANGL1Q8TAA9 524 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 OMA1Q96E52 524 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 ADOQ96SZ5 270 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 ARHGDIGQ99819 225 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 HOXD1Q9GZZ0 328 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 NTN4Q9HB63 628 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 NDUFAF4Q9P032 175 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 SLC13A4Q9UKG4 626 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 ABCG2Q9UNQ0 655 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 CHST2Q9Y4C5 530 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 ENPP4Q9Y6X5 453 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 CLDN24A6NM45 220 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 M0R3H8 397 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 CASQ2O14958 399 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 KLF4O43474 513 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 ADAM11O75078 769 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 ITGA2P17301 1181 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 SRD5A1P18405 259 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 TBXA2RP21731 343 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 ABCD3P28288 659 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 LCN1P31025 176 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 YAP1P46937 504 aaKnown RBP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 TMED10P49755 219 aaKnown RBP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 RNF144AP50876 292 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 PNLIPRP2P54317 469 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 NRG3P56975 720 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 NRF1Q16656 503 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 GRAMD1BQ3KR37 738 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 LIN52Q52LA3 116 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 KLHL26Q53HC5 615 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 PDZK1Q5T2W1 519 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 OR2T5Q6IEZ7 315 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 PLXDC2Q6UX71 529 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 P4HA3Q7Z4N8 544 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 YRDCQ86U90 279 aaKnown RBP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 ICA1LQ8NDH6 482 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 OR1J4Q8NGS1 313 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 OR2T29Q8NH02 315 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 AKAP1Q92667 903 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF300Q96RE9 604 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF347Q96SE7 839 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 RHNO1Q9BSD3 238 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 TMEM204Q9BSN7 226 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 BARX1Q9HBU1 254 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 UBQLN4Q9NRR5 601 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 RLIMQ9NVW2 624 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 FLRT3Q9NZU0 649 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 SLC9A8Q9Y2E8 581 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 FAM32AQ9Y421 112 aaKnown RBP10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 DTNAQ9Y4J8 743 aa10.09□□□□□ -0.79
TRAPPC4-213ENST00000533149 SERINC4A6NH21 518 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 SAC3D1A6NKF1 404 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 J3KTA2 159 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 GPRIN2O60269 458 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 PPM1BO75688 479 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 PRSS23O95084 383 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 PLAUP00749 431 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 NAGAP17050 411 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 IL12BP29460 328 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 CASP3P42574 277 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 FBXW4P57775 412 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 FGFBP1Q14512 234 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 LRRC36Q1X8D7 754 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 TMEM249Q2WGJ8 235 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 OGFRL1Q5TC84 451 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 BICRALQ6AI39 1079 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 VWA1Q6PCB0 445 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 C22orf34Q6ZV56 151 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF614Q8N883 585 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR6T1Q8NGN1 323 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 CNOT9Q92600 299 aaKnown RBP10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF845Q96IR2 970 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 TNFRSF13CQ96RJ3 184 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 PRR14Q9BWN1 585 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 KLHL4Q9C0H6 718 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 OPN3Q9H1Y3 402 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms