RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 MOAP1Q96BY2 351 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 TUBGCP3Q96CW5 907 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 FAHD2AQ96GK7 314 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 ALKBH3Q96Q83 286 aaPredicted RBP7.75□□□□□ -1.17
USF1-210ENST00000531842 LRRC37BQ96QE4 947 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 DOK1Q99704 481 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 SLC6A7Q99884 636 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 DUSP26Q9BV47 211 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 LAT2Q9GZY6 243 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 NELFAQ9H3P2 528 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 SSU72Q9NP77 194 aaKnown RBP7.75□□□□□ -1.17
USF1-210ENST00000531842 ACER3Q9NUN7 267 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 CHRNA9Q9UGM1 479 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 DCTN4Q9UJW0 460 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 PCDHB10Q9UN67 800 aa7.75□□□□□ -1.17
USF1-210ENST00000531842 WDR91A4D1P6 747 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 DUXAA6NLW8 204 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 RGS16O15492 202 aaPredicted RBP7.74□□□□□ -1.17
USF1-210ENST00000531842 DNAJA2O60884 412 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 SEC14L2O76054 403 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 SNUPNO95149 360 aaKnown RBP7.74□□□□□ -1.17
USF1-210ENST00000531842 AKR7A3O95154 331 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 PMS2P2O95744 297 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 HPXP02790 462 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 EPHA1P21709 976 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 MATN1P21941 496 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 MPGP29372 298 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 PGM1P36871 562 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 RBMXP38159 391 aaKnown RBP7.74□□□□□ -1.17
USF1-210ENST00000531842 MAGEA8P43361 318 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 SELENOPP49908 381 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 PPOXP50336 477 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 SEC24CP53992 1094 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 HILS1P60008 231 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 H3F3AP84243 136 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 SLC17A1Q14916 467 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 MAD2L1BPQ15013 274 aaPredicted RBP7.74□□□□□ -1.17
USF1-210ENST00000531842 CHI3L2Q15782 390 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 ELFN2Q5R3F8 820 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 PRR31Q5SQ13 230 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 C6orf136Q5SQH8 315 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 ANKRD16Q6P6B7 361 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 EIF3MQ7L2H7 374 aaKnown RBP7.74□□□□□ -1.17
USF1-210ENST00000531842 C6orf120Q7Z4R8 191 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 GLCCI1Q86VQ1 547 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 ZNF786Q8N393 782 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 TMEM99Q8N816 258 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 ZNF781Q8N8C0 355 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 ZDHHC22Q8N966 263 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 OR1K1Q8NGR3 316 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 ZNF563Q8TA94 476 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 PSMA8Q8TAA3 256 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 SFXN5Q8TD22 340 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 UBASH3BQ8TF42 649 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 FAM216AQ8WUB2 273 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 WDR60Q8WVS4 1066 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 TMEM234Q8WY98 164 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 ST8SIA1Q92185 356 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 RAB8BQ92930 207 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 YIPF5Q969M3 257 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 TMEM186Q96B77 213 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 TLCD1Q96CP7 247 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 COQ8BQ96D53 544 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 ZMYND19Q96E35 227 aaPredicted RBP7.74□□□□□ -1.17
USF1-210ENST00000531842 ZHX1-C8orf76Q96EF9 292 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 RAB1BQ9H0U4 201 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 MYOZ1Q9NP98 299 aaPredicted RBP7.74□□□□□ -1.17
USF1-210ENST00000531842 EXD2Q9NVH0 621 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 HAO1Q9UJM8 370 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 FZR1Q9UM11 496 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 PCDHGB4Q9UN71 923 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 SPEF1Q9Y4P9 236 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 PPIAL4AQ9Y536 164 aa7.74□□□□□ -1.17
USF1-210ENST00000531842 TMED7-TICAM2A0A0A6YYA0 188 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 RNF103-CHMP3A0A140T963 221 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 GPR171O14626 319 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 BIRC5O15392 142 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 STX11O75558 287 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 UPK3AO75631 287 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 AK1P00568 194 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 CRYAAP02489 173 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 ARAFP10398 606 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 G6PDP11413 515 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 BGNP21810 368 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 ZFP36P26651 326 aaKnown RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 SERPINB5P36952 375 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 ALDH3B1P43353 468 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 IDH2P48735 452 aaKnown RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 HBA1P69905 142 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 FUT5Q11128 374 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 BNIP2Q12982 314 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 EFNB3Q15768 340 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 ZNF141Q15928 474 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 ATAD3BQ5T9A4 648 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 KRT80Q6KB66 452 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 SHQ1Q6PI26 577 aaKnown RBP7.73□□□□□ -1.17
USF1-210ENST00000531842 KLHL24Q6TFL4 600 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 SSX8Q7RTT4 187 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 AAED1Q7RTV5 226 aa7.73□□□□□ -1.17
USF1-210ENST00000531842 GPAT4Q86UL3 456 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms