RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PRAMEF27A3QJZ7 478 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 CLDN24A6NM45 220 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 B2RBV5 119 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 HNRNPCL2B2RXH8 293 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 HNRNPCL3B7ZW38 293 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 C5orf58C9J3I9 102 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 AIM2O14862 343 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 GYG2O15488 501 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 GPIP06744 558 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 HNRNPCL4P0DMR1 293 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 PAX1P15863 534 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 COX5AP20674 150 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 TACR3P29371 465 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 IDUAP35475 653 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 NUDT2P50583 147 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 SLC16A1P53985 500 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 ATP5J2P56134 94 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 EPS8Q12929 822 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 FADDQ13158 208 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 NFYCQ13952 458 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 ETFDHQ16134 617 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 DNAL1Q4LDG9 190 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 COX20Q5RI15 118 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 RNF220Q5VTB9 566 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 WBP2NLQ6ICG8 309 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 OR7E24Q6IFN5 339 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 HACD2Q6Y1H2 254 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 ARPINQ7Z6K5 226 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 ARHGAP24Q8N264 748 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 DEPDC4Q8N2C3 294 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 DPP10Q8N608 796 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 GTPBP3Q969Y2 492 aaKnown RBP9.22□□□□□ -0.93
NR1I3-222ENST00000506018 ARL5BQ96KC2 179 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 OR11A1Q9GZK7 315 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 GSX1Q9H4S2 264 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-222ENST00000506018 ALG2Q9H553 416 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 TAS2R16Q9NYV7 291 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 UPB1Q9UBR1 384 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 OSGIN1Q9UJX0 560 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 ING1Q9UK53 422 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-222ENST00000506018 CORO2BQ9UQ03 480 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 MGAT4BQ9UQ53 548 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 LAMP3Q9UQV4 416 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 CADP27708 2225 aa9.21□□□□□ -0.93
NR1I3-222ENST00000506018 TMEM72A0PK05 275 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 CDHR4A6H8M9 788 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 OR5H1A6NKK0 313 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 ZNF716A6NP11 495 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 EVPLLA8MZ36 301 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 AP3D1O14617 1153 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 BCAS1O75363 584 aaPredicted RBP9.21□□□□□ -0.94
NR1I3-222ENST00000506018 PGM3O95394 542 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 PLAUP00749 431 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 THBS1P07996 1170 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 ETFAP13804 333 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 IGHV1-2P23083 117 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 PPIBP23284 216 aaKnown RBP9.21□□□□□ -0.94
NR1I3-222ENST00000506018 TGFBR3Q03167 851 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 BSPH1Q075Z2 132 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 TRMT5Q32P41 509 aaKnown RBP9.21□□□□□ -0.94
NR1I3-222ENST00000506018 C1QTNF12Q5T7M4 302 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 PRAMEF8Q5VWM4 474 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 PRAMEF7Q5VXH5 474 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 REP15Q6BDI9 236 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 PAQR6Q6TCH4 344 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 TMEM108Q6UXF1 575 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 CASP12Q6UXS9 341 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 ZNF836Q6ZNA1 936 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 ABHD12BQ7Z5M8 362 aaPredicted RBP9.21□□□□□ -0.94
NR1I3-222ENST00000506018 KRTAP1-3Q8IUG1 177 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 CADM2Q8N3J6 435 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 SMAP2Q8WU79 429 aaPredicted RBP9.21□□□□□ -0.94
NR1I3-222ENST00000506018 SLC38A5Q8WUX1 472 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 VPS33AQ96AX1 596 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 RCN3Q96D15 328 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 POM121Q96HA1 1249 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 BTBD10Q9BSF8 475 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 MMADHCQ9H3L0 296 aaPredicted RBP9.21□□□□□ -0.94
NR1I3-222ENST00000506018 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 ZNF443Q9Y2A4 671 aaPredicted RBP9.21□□□□□ -0.94
NR1I3-222ENST00000506018 VPS13CQ709C8 3753 aa9.21□□□□□ -0.94
NR1I3-222ENST00000506018 DSPPQ9NZW4 1301 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 ERICH4A6NGS2 130 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 A8MVM7 634 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 H7C1Q1 480 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 CLIC1O00299 241 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 RAD51DO75771 328 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 VAMP5O95183 116 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 IGHV3-9P01782 118 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 HEXAP06865 529 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 TFPTP0C1Z6 253 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 T-ENOLP0DO92 83 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 GTF2E2P29084 291 aaKnown RBP9.2□□□□□ -0.94
NR1I3-222ENST00000506018 H3F3AP84243 136 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 LTBQ06643 244 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 FAPQ12884 760 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 TUSC1Q2TAM9 212 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 ZNF672Q499Z4 452 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-222ENST00000506018 ZNF311Q5JNZ3 666 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 OTUD3Q5T2D3 398 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms