RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 M0R3G1 203 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 GPX5O75715 221 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 PRKCAP17252 672 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 TCN2P20062 427 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 ATP6V1E1P36543 226 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 CLK1P49759 484 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 NUBP1P53384 320 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 RPS3AP61247 264 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 C1DQ13901 141 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 NDUFAF7Q7L592 441 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 FAM122BQ7Z309 247 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 SLC15A4Q8N697 577 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 FAM98AQ8NCA5 519 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 NPEPL1Q8NDH3 523 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 OR9Q1Q8NGQ5 310 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 ZPLD1Q8TCW7 415 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 RASD2Q96D21 266 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 NMNAT3Q96T66 252 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 TIMP4Q99727 224 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 FKRPQ9H9S5 495 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 ZNF160Q9HCG1 818 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 CHCHD3Q9NX63 227 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 KLRF1Q9NZS2 232 aa12.4□□□□□ -0.42
SPTBN1-205ENST00000496323 NSG1A0A0A6YYJ2 146 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 CLPXO76031 633 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 RPL18Q07020 188 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 INPP5JQ15735 1006 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 ALG10Q5BKT4 473 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 LIPKQ5VXJ0 399 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 PHC2Q8IXK0 858 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 TMEM99Q8N816 258 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 PSD4Q8NDX1 1056 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 ZNRF4Q8WWF5 429 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 ZHX1-C8orf76Q96EF9 292 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 ARHGAP9Q9BRR9 750 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 OR11A1Q9GZK7 315 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 ADGRL4Q9HBW9 690 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 NDUFB11Q9NX14 153 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 SEC14L4Q9UDX3 406 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 KLHL21Q9UJP4 597 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 PCDHGA1Q9Y5H4 931 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 CHCHD2Q9Y6H1 151 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 KIF26BQ2KJY2 2108 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 IGLV3-32A0A0A0MS00 114 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 OR6C68A6NDL8 312 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 A8MVM7 634 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 LALBAP00709 142 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 F13BP05160 661 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 CD14P08571 375 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 INHBBP09529 407 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 RAB40ALP0C0E4 278 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 CPEP16870 476 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 PAICSP22234 425 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 TGM1P22735 817 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 CASP3P42574 277 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 CRYBB2P43320 205 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 SLC16A1P53985 500 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 SUMO3P55854 103 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 DLX5P56178 289 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 RPS7P62081 194 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 TMED1Q13445 227 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 CSRP2Q16527 193 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 ARMC4Q5T2S8 1044 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 GHDCQ8N2G8 530 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 ST8SIA1Q92185 356 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 RELTQ969Z4 430 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 TRMT61AQ96FX7 289 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 Q96M85 177 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 DCSTAMPQ9H295 470 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 HAO2Q9NYQ3 351 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 TAS2R5Q9NYW4 299 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 WIF1Q9Y5W5 379 aa12.39□□□□□ -0.43
SPTBN1-205ENST00000496323 CCDC187A0A096LP49 1063 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 TEX13CA0A0J9YWL9 993 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 C12orf71A8MTZ7 269 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 IDH3BO43837 385 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 SLC25A12O75746 678 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 CD63P08962 238 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 MRPL3P09001 348 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 UGT2B10P36537 528 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 CDKN2AP42771 156 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 HTR3AP46098 478 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 CTXN1P60606 82 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 HES3Q5TGS1 186 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 NANOGNBQ7Z5D8 188 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 PIP4P1Q86T03 277 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 ACBD7Q8N6N7 88 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 SMAP2Q8WU79 429 aaPredicted RBP12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 TMEM234Q8WY98 164 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 NMNAT2Q9BZQ4 307 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 SLIRPQ9GZT3 109 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 METTL7AQ9H8H3 244 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 PPP4R1LQ9P1A2 415 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 FARSAQ9Y285 508 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 PCDHGB6Q9Y5F9 930 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 SPIN1Q9Y657 262 aaPredicted RBP12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 CACNA1HO95180 2353 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 PRR33A8MZF0 331 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 ETV2O00321 342 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms