RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 UGT1A10Q9HAW8 530 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 UGT1A8Q9HAW9 530 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 KLRF1Q9NZS2 232 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 WDR45Q9Y484 360 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 AP4S1Q9Y587 144 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PLXNB2O15031 1838 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SSC5DA1L4H1 1573 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ADGRA3Q8IWK6 1321 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 KLF18A0A0U1RQI7 1052 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 FAM47DPA6NHR8 397 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 MSH4O15457 936 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 MAGEC1O60732 1142 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 FZD7O75084 574 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CDH16O75309 829 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RBMXL2O75526 392 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SEMA3DO95025 777 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 NPPAP01160 153 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 MT-ND2P03891 347 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 GAPDHP04406 335 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ACP2P11117 423 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TAC1P20366 129 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 STOMP27105 288 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 HLA-FP30511 346 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 AQP4P55087 323 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ATP6V0D1P61421 351 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SLC39A6Q13433 755 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CDH18Q13634 790 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 KRT33BQ14525 404 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 HNRNPA1L2Q32P51 320 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PPM1LQ5SGD2 360 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PRAMEF5Q5TYX0 476 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RSBN1Q5VWQ0 802 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PRAMEF6Q5VXH4 476 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 NUDCD3Q8IVD9 361 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PYROXD2Q8N2H3 581 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ASCC1Q8N9N2 400 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 KIAA0895Q8NCT3 520 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 LRRC20Q8TCA0 184 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SGK3Q96BR1 496 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TSSK3Q96PN8 268 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PANX1Q96RD7 426 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TRIM51Q9BSJ1 452 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TRIM15Q9C019 465 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 DNAJC12Q9UKB3 198 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RAP2CQ9Y3L5 183 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 MED23Q9ULK4 1368 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 A0A1B0GTH9 108 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 OR6C74A6NCV1 312 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 A6NDN8 102 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 FAM25AB3EWG3 89 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 FAM25CB3EWG5 89 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 FAM25GB3EWG6 89 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ATP6V1G2-DDX39BF2Z307 99 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 J3QRK9 145 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PSMD12O00232 456 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CYB561D2O14569 222 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TYROBPO43914 113 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CSTAP01040 98 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 IFNA14P01570 189 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 T-ENOLP0DO92 83 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SSTR2P30874 369 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SFTPDP35247 375 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SLC1A4P43007 532 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 YAP1P46937 504 aaKnown RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TGM4P49221 684 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ARRB1P49407 418 aaPredicted RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CDH6P55285 790 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 HILS1P60008 231 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 COPZ1P61923 177 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 IRF8Q02556 426 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 GCKRQ14397 625 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 DUSP5Q16690 384 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SLX4IPQ5VYV7 408 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 LPCAT4Q643R3 524 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TTLL10Q6ZVT0 673 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 FAM122BQ7Z309 247 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PIWIL4Q7Z3Z4 852 aaKnown RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 VRK3Q8IV63 474 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PARP8Q8N3A8 854 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ZNRF1Q8ND25 227 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 OR2Y1Q8NGV0 311 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ACTRT1Q8TDG2 376 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 FAM172AQ8WUF8 416 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 KCTD4Q8WVF5 259 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TRUB1Q8WWH5 349 aaKnown RBP2.49□□□□□ -2.01
UBXN4-208ENST00000490163 UBE2E3Q969T4 207 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 CEP170P1Q96L14 293 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 PSD2Q9BQI7 771 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 THTPAQ9BU02 230 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 EFHD1Q9BUP0 239 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 UCK1Q9HA47 277 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 S100A14Q9HCY8 104 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ERGIC3Q9Y282 383 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 AP3M1Q9Y2T2 418 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SNX24Q9Y343 169 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 SLC6A5Q9Y345 797 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 ZSWIM8A7E2V4 1837 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 MYH6P13533 1939 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 MYH4Q9Y623 1939 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 A0A0G2JND7 137 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms