RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 A0A1B0GX12 115 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 A0A1W2PNV4 684 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 TUBAL3A6NHL2 446 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 H3BNH8 94 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 SEC14L5O43304 696 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 GMFGO60234 142 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 CTAG2O75638 210 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 TGM6O95932 706 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 LINGO3P0C6S8 592 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 FCGR2AP12318 317 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 RHCEP18577 417 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 SUCLG1P53597 346 aaKnown RBP9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 CLDN15P56746 228 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 CLDN20P56880 219 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 PIN1Q13526 163 aaPredicted RBP9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 BLMHQ13867 455 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 ENTPD8Q5MY95 495 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 WDR88Q6ZMY6 472 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 DEF8Q6ZN54 512 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF440Q8IYI8 595 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 OFCC1Q8IZS5 231 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 SVOPLQ8N434 492 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 PIK3C3Q8NEB9 887 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 OR4C15Q8NGM1 316 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 OR5W2Q8NH69 310 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 B4GALNT2Q8NHY0 566 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 SMPDL3BQ92485 455 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 PRRC1Q96M27 445 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 RDH12Q96NR8 316 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 MCHR1Q99705 422 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 PRSS27Q9BQR3 290 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 RBM24Q9BX46 236 aaKnown RBP9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 CTPS2Q9NRF8 586 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 ACER3Q9NUN7 267 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 MED17Q9NVC6 651 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 PAQR5Q9NXK6 330 aaPredicted RBP9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 KLHL28Q9NXS3 571 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 MED12Q93074 2177 aa9.46□□□□□ -0.9
SCAMP4-208ENST00000489554 ANKHD1Q8IWZ3 2542 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 A0A1B0GWA3 101 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 CPSF4LA6NMK7 179 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 A6NNC1 897 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 A8MXE2 369 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 H0YC42 278 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 GTPBP1O00178 669 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 GNGT2O14610 69 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 MSTNO14793 375 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 CLOCKO15516 846 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 CYP7B1O75881 506 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 TNFSF13O75888 250 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 OR5F1O95221 314 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 GOSR1O95249 250 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 EPXP11678 715 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF26P17031 533 aaPredicted RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 RYKP34925 604 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 EIF1P41567 113 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 PCYT1AP49585 367 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 HMGA2P52926 109 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 IST1P53990 364 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 AQP4P55087 323 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 TPD52P55327 224 aaPredicted RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 SUMO3P55854 103 aaPredicted RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 RAC1P63000 192 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 PPP1R8Q12972 351 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 SNTB1Q13884 538 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 DAZAP2Q15038 168 aaPredicted RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 OR1Q1Q15612 314 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 SGCBQ16585 318 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 PLPPR5Q32ZL2 321 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC25A53Q5H9E4 307 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 OR2T5Q6IEZ7 315 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 PLXDC2Q6UX71 529 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 LINC00114Q6XXX2 140 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF550Q7Z398 422 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 AMIGO2Q86SJ2 522 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 LUZP2Q86TE4 346 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 GGNQ86UU5 652 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 EPHX4Q8IUS5 362 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 OR2T29Q8NH02 315 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 POC1BQ8TC44 478 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 ADAMTS16Q8TE57 1224 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 C3orf49Q96BT1 292 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 PIP5K1AQ99755 562 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF426Q9BUY5 554 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 POLDIP3Q9BY77 421 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 POLR2J2Q9GZM3 115 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 ADAM19Q9H013 955 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 POLR2J3Q9H1A7 115 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 ARMC7Q9H6L4 198 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 RNF122Q9H9V4 155 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 CACYBPQ9HB71 228 aaKnown RBP9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 RASSF1Q9NS23 344 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 GALNT8Q9NY28 637 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 RHCGQ9UBD6 479 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 DNAJB9Q9UBS3 223 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 LYVE1Q9Y5Y7 322 aa9.45□□□□□ -0.9
SCAMP4-208ENST00000489554 KIAA1549Q9HCM3 1950 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 PDZD2O15018 2839 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms