RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 GRPRP30550 384 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 AQP2P41181 271 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 FXYD6P3P58550 94 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 PLGLB1Q02325 96 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 PMS2P3Q13401 168 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 BLMHQ13867 455 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SGCBQ16585 318 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 GLYR1Q49A26 553 aaPredicted RBP9.05□□□□□ -0.96
USP11-211ENST00000489111 GXYLT1Q4G148 440 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 ALG10Q5BKT4 473 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 C1QL3Q5VWW1 255 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 MEDAGQ5VYS4 303 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SLC6A19Q695T7 634 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SLC25A25Q6KCM7 469 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 DPY19L2P2Q6ZN68 376 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 CCDC81Q6ZN84 652 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 CCDC103Q8IW40 242 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 LNX2Q8N448 690 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 TMEM178AQ8NBL3 297 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 ZNF540Q8NDQ6 660 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 MDS2Q8NDY4 140 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 OR5M1Q8NGP8 315 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 OR5J2Q8NH18 312 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 APH1BQ8WW43 257 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 RELTQ969Z4 430 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 DNAJA3Q96EY1 480 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 LRR1Q96L50 414 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 ERMAPQ96PL5 475 aaPredicted RBP9.05□□□□□ -0.96
USP11-211ENST00000489111 NPAS1Q99742 590 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 PTDSS2Q9BVG9 487 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 POTEKPQ9BYX7 375 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 CCDC86Q9H6F5 360 aaKnown RBP9.05□□□□□ -0.96
USP11-211ENST00000489111 ZNF552Q9H707 407 aaPredicted RBP9.05□□□□□ -0.96
USP11-211ENST00000489111 VCX3AQ9NNX9 186 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 CCNB1IP1Q9NPC3 277 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 ALKBH4Q9NXW9 302 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 HIF3AQ9Y2N7 669 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SLC6A5Q9Y345 797 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 CORINQ9Y5Q5 1042 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SNX5Q9Y5X3 404 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 KCNMB2Q9Y691 235 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 EFCAB10A6NFE3 127 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 GJE1A6NN92 205 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 MCIDASD6RGH6 385 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 PTGES3LE9PB15 166 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 KLRC4-KLRK1H3BQV0 150 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 M0R082 166 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 ENTPD6O75354 484 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 SERPINI2O75830 405 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 CLPTM1O96005 669 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 SMIM18P0DKX4 95 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 GABRB1P18505 474 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 IL11P20809 199 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 UQCRC1P31930 480 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 SFTPDP35247 375 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 CLK1P49759 484 aaKnown RBP9.04□□□□□ -0.96
USP11-211ENST00000489111 NUDT6P53370 316 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 CDH15P55291 814 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 RPL18Q07020 188 aaKnown RBP9.04□□□□□ -0.96
USP11-211ENST00000489111 MYBPHQ13203 477 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 FHL1Q13642 323 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 OR7A5Q15622 319 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 OCLNQ16625 522 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 SMN1Q16637 294 aaKnown RBP9.04□□□□□ -0.96
USP11-211ENST00000489111 ZNF766Q5HY98 468 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 TMEM201Q5SNT2 666 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 SLC35F1Q5T1Q4 408 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 LAIR2Q6ISS4 152 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 ZNF773Q6PK81 442 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 IGFN1Q86VF2 1251 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 FAM26EQ8N5C1 309 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 SCAIQ8N9R8 606 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 FAM98AQ8NCA5 519 aaKnown RBP9.04□□□□□ -0.96
USP11-211ENST00000489111 FDCSPQ8NFU4 85 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 MOSPD2Q8NHP6 518 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 MFSD8Q8NHS3 518 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 ZNF417Q8TAU3 575 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 IPCEF1Q8WWN9 437 aaPredicted RBP9.04□□□□□ -0.96
USP11-211ENST00000489111 TM9SF4Q92544 642 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 HAS2Q92819 552 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 RFKQ969G6 155 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 OTULINQ96BN8 352 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 SFXN2Q96NB2 322 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 OR5B2Q96R09 309 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 GPX7Q96SL4 187 aaPredicted RBP9.04□□□□□ -0.96
USP11-211ENST00000489111 ZNF587Q96SQ5 575 aaPredicted RBP9.04□□□□□ -0.96
USP11-211ENST00000489111 KATNB1Q9BVA0 655 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 HES7Q9BYE0 225 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 OR2B2Q9GZK3 357 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 CCDC90BQ9GZT6 254 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 CMC2Q9NRP2 79 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 MRPL39Q9NYK5 338 aaKnown RBP9.04□□□□□ -0.96
USP11-211ENST00000489111 KLHL21Q9UJP4 597 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 GPR52Q9Y2T5 361 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 HDGFL3Q9Y3E1 203 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 KNTC1P50748 2209 aa9.04□□□□□ -0.96
USP11-211ENST00000489111 OR2M5A3KFT3 312 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 PINLYPA6NC86 204 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms