RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 WRAP73Q9P2S5 460 aaPredicted RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 RAB26Q9ULW5 256 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 UBQLN1Q9UMX0 589 aaKnown RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 SCML2Q9UQR0 700 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 POLDIP2Q9Y2S7 368 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 MEMO1Q9Y316 297 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 AK6Q9Y3D8 172 aaKnown RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 TIMM10BQ9Y5J6 103 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 NPTNQ9Y639 398 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 RPAP1Q9BWH6 1393 aaPredicted RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 LOC100131303A0A0U1RQF7 123 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 SMIM28A0A1B0GU29 152 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 PSMB11A5LHX3 300 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 ARHGEF35A5YM69 484 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 GOLGA8OA6NCC3 632 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 PP2D1A8MPX8 630 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 E9PBE3 544 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 GOLGA8NF8WBI6 632 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 FCN1O00602 326 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 NBR2O15453 112 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 MED7O43513 233 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 ERLIN1O75477 346 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 AP2A1O95782 977 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 GCFC2P16383 781 aaKnown RBP2.19□□□□□ -2.06
RFC4-213ENST00000489028 CYP2B6P20813 491 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 PCMT1P22061 227 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 CCNCP24863 283 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 GCKP35557 465 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 BTDP43251 543 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 KIR2DS2P43631 304 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 RPS10P46783 165 aaKnown RBP2.19□□□□□ -2.06
RFC4-213ENST00000489028 HNRNPA3P51991 378 aaKnown RBP2.19□□□□□ -2.06
RFC4-213ENST00000489028 SEC61GP60059 68 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 CCNA1P78396 465 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 BEX3Q00994 111 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 MRPL28Q13084 256 aaKnown RBP2.19□□□□□ -2.06
RFC4-213ENST00000489028 PLD1Q13393 1074 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 C1orf61Q13536 156 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 CUL2Q13617 745 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 SLC15A2Q16348 729 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 TRIM16LQ309B1 348 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 TIGITQ495A1 244 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 CFAP221Q4G0U5 840 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 PDZK1Q5T2W1 519 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 LIPNQ5VXI9 398 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 TPGS2Q68CL5 300 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 CYB5R2Q6BCY4 276 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 FAM220AQ7Z4H9 259 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 FAM228AQ86W67 206 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 BBS5Q8N3I7 341 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 KIR3DL3Q8N743 410 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 CEP112Q8N8E3 955 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 OR9K2Q8NGE7 335 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 SLC2A14Q8TDB8 520 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 ANKRD49Q8WVL7 239 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 C10orf35Q96D05 121 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 TCEANC2Q96MN5 208 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 CCNL2Q96S94 520 aaPredicted RBP2.19□□□□□ -2.06
RFC4-213ENST00000489028 NRTNQ99748 197 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 CHRDL1Q9BU40 450 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 SPATA16Q9BXB7 569 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 RAB34Q9BZG1 259 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 ROPN1BQ9BZX4 212 aaPredicted RBP2.19□□□□□ -2.06
RFC4-213ENST00000489028 RHBGQ9H310 441 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 POLE4Q9NR33 117 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 SIGLEC8Q9NYZ4 499 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 SPATA7Q9P0W8 599 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 PRPF19Q9UMS4 504 aaKnown RBP2.19□□□□□ -2.06
RFC4-213ENST00000489028 COPS3Q9UNS2 423 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 THSD7BQ9C0I4 1608 aa2.19□□□□□ -2.06
RFC4-213ENST00000489028 A0A1B0GUA9 196 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 A0A1B0GVL5 298 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 ZNF716A6NP11 495 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 SULT2B1O00204 365 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 PRKAB2O43741 272 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 CXCL13O43927 109 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 PRKYO43930 277 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 NPIPB7O75200 414 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 DIRAS1O95057 198 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 AGTP01019 485 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 IGHG4P01861 327 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 UQCRFS1P1P0C7P4 283 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 ZNF735P0CB33 412 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 TROVE2P10155 538 aaKnown RBP eCLIP2.18□□□□□ -2.06
RFC4-213ENST00000489028 SFTPCP11686 197 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 HTR1EP28566 365 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 GCAP28676 217 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 GNA11P29992 359 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 FGF9P31371 208 aaPredicted RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 UGT1A5P35504 534 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 DAP3P51398 398 aaKnown RBP2.18□□□□□ -2.06
RFC4-213ENST00000489028 PRKXP51817 358 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 PLK1P53350 603 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 ATP1B3P54709 279 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 OGDHQ02218 1023 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 SLC10A7Q0GE19 358 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 BST1Q10588 318 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 RCN1Q15293 331 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 PPP1R7Q15435 360 aa2.18□□□□□ -2.06
RFC4-213ENST00000489028 KLHL38Q2WGJ6 581 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms