RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RNFT2Q96EX2 444 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 ZFHX2Q9C0A1 2572 aaPredicted RBP12.59□□□□□ -0.39
COPS7B-221ENST00000488111 IFT46Q9NQC8 304 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 ENAMQ9NRM1 1142 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 ACSS1Q9NUB1 689 aaPredicted RBP12.59□□□□□ -0.39
COPS7B-221ENST00000488111 TRPC4Q9UBN4 977 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 CBLCQ9ULV8 474 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 MAP4K5Q9Y4K4 846 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 ADAMTS20P59510 1910 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 A0A1B0GX78 115 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 NME6O75414 186 aaPredicted RBP12.59□□□□□ -0.39
COPS7B-221ENST00000488111 LALBAP00709 142 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 TCRBP04435 133 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 HLA-DPB1P04440 258 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 MPIP34949 423 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 SOX18P35713 384 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 CD79BP40259 229 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 FOXL2P58012 376 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 CLVS2Q5SYC1 327 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 LRRC28Q86X40 367 aaPredicted RBP12.59□□□□□ -0.39
COPS7B-221ENST00000488111 PRSS58Q8IYP2 241 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 BMPERQ8N8U9 685 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 KAT2AQ92830 837 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 ANKRD9Q96BM1 317 aaPredicted RBP12.59□□□□□ -0.39
COPS7B-221ENST00000488111 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 ZNF304Q9HCX3 659 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 PMS2P1A4D2B8 440 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 PCP4L1A6NKN8 68 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 KRBOX1C9JBD0 128 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 DLL1O00548 723 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 PRODHO43272 600 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 GPR75O95800 540 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 H1F0P07305 194 aaKnown RBP12.58□□□□□ -0.4
COPS7B-221ENST00000488111 OR12D1P0DN82 309 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 RBMS1P29558 406 aaKnown RBP12.58□□□□□ -0.4
COPS7B-221ENST00000488111 PRKAG1P54619 331 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 RAG2P55895 527 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 RPS26P62854 115 aaKnown RBP12.58□□□□□ -0.4
COPS7B-221ENST00000488111 GINS1Q14691 196 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 VWA2Q5GFL6 755 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 ARHGAP40Q5TG30 622 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 TCTN3Q6NUS6 607 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 CD300LDQ6UXZ3 194 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 PIP4P1Q86T03 277 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 PIAS4Q8N2W9 510 aaPredicted RBP12.58□□□□□ -0.4
COPS7B-221ENST00000488111 LRRC25Q8N386 305 aaPredicted RBP12.58□□□□□ -0.4
COPS7B-221ENST00000488111 ADAMTS14Q8WXS8 1223 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 ERMAPQ96PL5 475 aaPredicted RBP12.58□□□□□ -0.4
COPS7B-221ENST00000488111 IL20Q9NYY1 176 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 KLF2Q9Y5W3 355 aaPredicted RBP12.58□□□□□ -0.4
COPS7B-221ENST00000488111 SLC22A23A1A5C7 686 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 TGFBR3LH3BV60 316 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 APOL3O95236 402 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 CPMP14384 443 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 MAOAP21397 527 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 FBLP22087 321 aaKnown RBP12.58□□□□□ -0.4
COPS7B-221ENST00000488111 UQCRC2P22695 453 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 CBX5P45973 191 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 E2F1Q01094 437 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 ST3GAL2Q16842 350 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 GSG1Q2KHT4 349 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 RHBDD2Q6NTF9 364 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 ACSM5Q6NUN0 579 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 GPR32P1Q8NGA4 272 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 MVB12AQ96EY5 273 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 TMED9Q9BVK6 235 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 C1QTNF6Q9BXI9 259 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 PRTFDC1Q9NRG1 225 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 ASB6Q9NWX5 421 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 ZNF175Q9Y473 711 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 HRH3Q9Y5N1 445 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 SESN1Q9Y6P5 492 aa12.58□□□□□ -0.4
COPS7B-221ENST00000488111 A8MXK9 166 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 EEF1E1O43324 174 aaKnown RBP12.57□□□□□ -0.4
COPS7B-221ENST00000488111 PEPDP12955 493 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 ZNF28P17035 718 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 MC3RP41968 323 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 CDK5Q00535 292 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 COX10Q12887 443 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 MLC1Q15049 377 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 CEBPEQ15744 281 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 SLC36A2Q495M3 483 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 MINDY4Q4G0A6 757 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 RGS7BPQ6MZT1 257 aaPredicted RBP12.57□□□□□ -0.4
COPS7B-221ENST00000488111 TMEM151BQ8IW70 566 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 GIMAP1Q8WWP7 306 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 CMKLR1Q99788 373 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 CDCP1Q9H5V8 836 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 NEUROD4Q9HD90 331 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 ACAD8Q9UKU7 415 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 CFAP54Q96N23 3096 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 SPAARA0A1B0GVQ0 90 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 EIF4EP06730 217 aaKnown RBP12.57□□□□□ -0.4
COPS7B-221ENST00000488111 NT5EP21589 574 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 GALP22466 123 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 PPP2R1BP30154 601 aa12.57□□□□□ -0.4
COPS7B-221ENST00000488111 CCKBRP32239 447 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms