RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 OXSMQ9NWU1 459 aa9.81□□□□□ -0.84
BRCA1-213ENST00000476777 DCDC2Q9UHG0 476 aa9.81□□□□□ -0.84
BRCA1-213ENST00000476777 OSGIN1Q9UJX0 560 aa9.81□□□□□ -0.84
BRCA1-213ENST00000476777 TMED7Q9Y3B3 224 aa9.81□□□□□ -0.84
BRCA1-213ENST00000476777 FIS1Q9Y3D6 152 aa9.81□□□□□ -0.84
BRCA1-213ENST00000476777 DNAJC15Q9Y5T4 150 aa9.81□□□□□ -0.84
BRCA1-213ENST00000476777 ARHGAP32A7KAX9 2087 aa9.81□□□□□ -0.84
BRCA1-213ENST00000476777 A0A096LPE4 126 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 IGHV2OR16-5A0A0B4J2B6 119 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 A0A1W2PPZ6 126 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 VSTM5A8MXK1 200 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 TMEM114B3SHH9 223 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 ZNF587BE7ETH6 402 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 KRT33AO76009 404 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 AVPP01185 164 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 TFP02787 698 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 PROCP04070 461 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 GAAP10253 952 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 SAGP10523 405 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 HTR3AP46098 478 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 IDH2P48735 452 aaKnown RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 HBA1P69905 142 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 POU3F1Q03052 451 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 ELFN2Q5R3F8 820 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 OTUD3Q5T2D3 398 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 KANK2Q63ZY3 851 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 TYW3Q6IPR3 259 aaKnown RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 FAHD2BQ6P2I3 314 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 SHISA2Q6UWI4 295 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 LINGO2Q7L985 606 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 C6orf120Q7Z4R8 191 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 KRTCAP2Q8N6L1 136 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 NATD1Q8N6N6 113 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 TMEM99Q8N816 258 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 OR51F2Q8NH61 342 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 MZB1Q8WU39 189 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 OIT3Q8WWZ8 545 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 PMM1Q92871 262 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 ZG16BQ96DA0 208 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 FAHD2AQ96GK7 314 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 ALKBH3Q96Q83 286 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 PIF1Q9H611 641 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 MOV10Q9HCE1 1003 aaKnown RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 ESM1Q9NQ30 184 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 EXOSC3Q9NQT5 275 aaKnown RBP9.8□□□□□ -0.84
BRCA1-213ENST00000476777 ATAD3AQ9NVI7 634 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 TREM2Q9NZC2 230 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 GIMAP2Q9UG22 337 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 PYCARDQ9ULZ3 195 aa9.8□□□□□ -0.84
BRCA1-213ENST00000476777 LOC105371242A0A075B767 164 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 OR6C65A6NJZ3 312 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 LIPT2A6NK58 231 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 AQP7P3A6NL99 342 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 CLDN24A6NM45 220 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 CFLARO15519 480 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 UPK3AO75631 287 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 AKR7A3O95154 331 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 PNPP00491 289 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 GUSBP08236 651 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 ABHD2P08910 425 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 COL8A2P25067 703 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 SOAT1P35610 550 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 GPR6P46095 362 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-213ENST00000476777 SELENOPP49908 381 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 P2RY4P51582 365 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 POLR2HP52434 150 aaKnown RBP9.79□□□□□ -0.84
BRCA1-213ENST00000476777 LMO4P61968 165 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 ETF1P62495 437 aaKnown RBP9.79□□□□□ -0.84
BRCA1-213ENST00000476777 KCNJ10P78508 379 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 UGT3A2Q3SY77 523 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 C16orf62Q7Z3J2 963 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 HMGN2P46Q86SG4 172 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 GPAT4Q86UL3 456 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 CLEC4FQ8N1N0 589 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 ARFGAP2Q8N6H7 521 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 ZDHHC22Q8N966 263 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 IFT81Q8WYA0 676 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 G6PC2Q9NQR9 355 aa9.79□□□□□ -0.84
BRCA1-213ENST00000476777 TRAV20A0A0B4J274 112 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 ZNF503-AS2A6NEH8 195 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 TMEM229AB2RXF0 380 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 TMEM233B4DJY2 109 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 AP3D1O14617 1153 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 PLIN3O60664 434 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 GLRA3O75311 464 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 LYPLA1O75608 230 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-213ENST00000476777 CHEK2O96017 543 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 HPXP02790 462 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 GPIP06744 558 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 CBR1P16152 277 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 ACHEP22303 614 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 MAPK1P28482 360 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 TACR3P29371 465 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 CASQ1P31415 396 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 MAP2K6P52564 334 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 FUT5Q11128 374 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 SNTB2Q13425 540 aaKnown RBP9.78□□□□□ -0.84
BRCA1-213ENST00000476777 CEACAM7Q14002 265 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 OR7A5Q15622 319 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 PDCD2Q16342 344 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms