RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TAS2R43P59537 309 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 SRP54P61011 504 aaKnown RBP10.04□□□□□ -0.8
C9orf3-214ENST00000473778 MRPL28Q13084 256 aaKnown RBP10.04□□□□□ -0.8
C9orf3-214ENST00000473778 GSG1Q2KHT4 349 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 BICRALQ6AI39 1079 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 NPSR1Q6W5P4 371 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 MAMSTRQ6ZN01 415 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 TEX19Q8NA77 164 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 TOE1Q96GM8 510 aaKnown RBP10.04□□□□□ -0.8
C9orf3-214ENST00000473778 GPR174Q9BXC1 333 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.04□□□□□ -0.8
C9orf3-214ENST00000473778 CDCP1Q9H5V8 836 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 MRPL15Q9P015 296 aaKnown RBP10.04□□□□□ -0.8
C9orf3-214ENST00000473778 ZNF222Q9UK12 451 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 MGAT4AQ9UM21 535 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 NPFFR2Q9Y5X5 522 aa10.04□□□□□ -0.8
C9orf3-214ENST00000473778 CACNA1CQ13936 2221 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 TRAV1-2A0A0B4J238 106 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 URADA6NGE7 173 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 EPOPA6NHQ4 379 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 G3V3Q6 166 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 GMDSO60547 372 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 EGFP01133 1207 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 HPXP02790 462 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 UCHL1P09936 223 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 PTHLHP12272 177 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 HOXB2P14652 356 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 GRPRP30550 384 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 PBX2P40425 430 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 NANOS3P60323 173 aaKnown RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ZP1P60852 638 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 SIRPAP78324 504 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 KLF9Q13886 244 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 TRAM1Q15629 374 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ZNF542PQ5EBM4 170 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ZBTB37Q5TC79 503 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 FAM98AQ8NCA5 519 aaKnown RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 OR9A4Q8NGU2 314 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 RGP1Q92546 391 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 RERGQ96A58 199 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 GPR137Q96N19 417 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 DDOQ99489 341 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 CACNG6Q9BXT2 260 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 SLC25A18Q9H1K4 315 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 OR51J1Q9H342 316 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 DPAGT1Q9H3H5 408 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 FKRPQ9H9S5 495 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 B3GNT2Q9NY97 397 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 GNG8Q9UK08 70 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 FLVCR2Q9UPI3 526 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 PCDHGA9Q9Y5G4 932 aaKnown RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ENTPD2Q9Y5L3 495 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ACOD1A6NK06 481 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 FAM171A2A8MVW0 826 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 KLF8O95600 359 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 STOMP27105 288 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 SLC6A6P31641 620 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 CLDN12P56749 244 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 RPS15P62841 145 aaKnown RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ARHGAP11AQ6P4F7 1023 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 FAM199XQ6PEV8 388 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ZCCHC12Q6PEW1 402 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 RNF44Q7L0R7 432 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 CMTM4Q8IZR5 234 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ARHGEF39Q8N4T4 335 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 MS4A15Q8N5U1 240 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 CSNK1A1LQ8N752 337 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 NPEPL1Q8NDH3 523 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 ZNF524Q96C55 264 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 RASD2Q96D21 266 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 SPACA7Q96KW9 195 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 PRDM9Q9NQV7 894 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 POT1Q9NUX5 634 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 CEP290O15078 2479 aa10.03□□□□□ -0.8
C9orf3-214ENST00000473778 TRBV2A0A0J9YWF9 115 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 TRABD2BA6NFA1 517 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 ZNF593O00488 134 aaPredicted RBP10.02□□□□□ -0.8
C9orf3-214ENST00000473778 SERPINI2O75830 405 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 DHFRP00374 187 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 PER3P56645 1201 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 ACTC1P68032 377 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 ACTA1P68133 377 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 ERV3-1Q14264 604 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 C9orf50Q5SZB4 431 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 HES5Q5TA89 166 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 SLC35F2Q8IXU6 374 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 SLC22A18ASQ8N1D0 253 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 RCBTB1Q8NDN9 531 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 OR6C4Q8NGE1 309 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 OR10Z1Q8NGY1 313 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 OR4C3Q8NH37 302 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 SLC2A12Q8TD20 617 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 ZNF431Q8TF32 576 aaPredicted RBP10.02□□□□□ -0.8
C9orf3-214ENST00000473778 PCNPQ8WW12 178 aaKnown RBP10.02□□□□□ -0.8
C9orf3-214ENST00000473778 DACT3Q96B18 629 aaPredicted RBP10.02□□□□□ -0.8
C9orf3-214ENST00000473778 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 SIPA1Q96FS4 1042 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 MRGPRX1Q96LB2 322 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 LMF1Q96S06 567 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 CNN2Q99439 309 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms