RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF229Q9UJW7 825 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 PCDHGB6Q9Y5F9 930 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 IGLV3-32A0A0A0MS00 114 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 CD36P16671 472 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 LIPAP38571 399 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 ERVK-25P63136 954 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 CHAF1BQ13112 559 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 ATP1A4Q13733 1029 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 ALG10Q5BKT4 473 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 C1orf140Q5VVS0 124 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 B3GNTL1Q67FW5 361 aaPredicted RBP16.43■□□□□ 0.22
SMC4-211ENST00000469858 P2RY8Q86VZ1 359 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 ARMC10Q8N2F6 343 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 FAM98AQ8NCA5 519 aaKnown RBP16.43■□□□□ 0.22
SMC4-211ENST00000469858 OR4F15Q8NGB8 312 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 PTP4A1Q93096 173 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 DCUN1D5Q9BTE7 237 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 PTDSS2Q9BVG9 487 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 OR51V1Q9H2C8 321 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 FGF20Q9NP95 211 aaPredicted RBP16.43■□□□□ 0.22
SMC4-211ENST00000469858 NRIP3Q9NQ35 241 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 FBXL2Q9UKC9 423 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 DOCK10Q96BY6 2186 aa16.43■□□□□ 0.22
SMC4-211ENST00000469858 SHISA8B8ZZ34 492 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 MYL12BO14950 172 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 NPIPB7O75200 414 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 SERPINI2O75830 405 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 CCL3P10147 92 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 CLUP10909 449 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 MYL12AP19105 171 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 PAICSP22234 425 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 TCEA1P23193 301 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 UQCRC1P31930 480 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 ATP6V1E1P36543 226 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 TGFBR2P37173 567 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 ETV1P50549 477 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 SLC16A1P53985 500 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 RPS7P62081 194 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 RPL18Q07020 188 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 SNTA1Q13424 505 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 ARMCX4Q5H9R4 360 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 FAM69AQ5T7M9 428 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 MEPCEQ7L2J0 689 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 TMPRSS12Q86WS5 348 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 RAB43Q86YS6 212 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 IL22RA1Q8N6P7 574 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 OR2M3Q8NG83 312 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 GPX7Q96SL4 187 aaPredicted RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 MND1Q9BWT6 205 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 CPNE5Q9HCH3 593 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 MUC6Q6W4X9 2439 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 FREM2Q5SZK8 3169 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 AHSA1O95433 338 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 F13BP05160 661 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 SERPINA7P05543 415 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 APOBEC1P41238 236 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.42■□□□□ 0.227e-6■■■□□ 17.7
SMC4-211ENST00000469858 DOC2BQ14184 412 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 PLPPR5Q32ZL2 321 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 ZNF468Q5VIY5 522 aaPredicted RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 ERI1Q8IV48 349 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 DND1Q8IYX4 353 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 WDSUB1Q8N9V3 476 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 OR4K17Q8NGC6 315 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 STK35Q8TDR2 534 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 RASD2Q96D21 266 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 SECISBP2Q96T21 854 aaKnown RBP16.42■□□□□ 0.22
SMC4-211ENST00000469858 MGLLQ99685 303 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 B3GNT4Q9C0J1 378 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 ANKRD10Q9NXR5 420 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 SEC14L4Q9UDX3 406 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 IL17BQ9UHF5 180 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 KLHL21Q9UJP4 597 aa16.42■□□□□ 0.22
SMC4-211ENST00000469858 PTPRBP23467 1997 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 A0A1W2PPW3 197 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 ARPC3O15145 178 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 GABARAPO95166 117 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 MT-ATP6P00846 226 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 GYPBP06028 91 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 CTXN1P60606 82 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 ANKDD1AQ495B1 522 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 RNLSQ5VYX0 342 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 MAMDC2Q7Z304 686 aaPredicted RBP16.41■□□□□ 0.22
SMC4-211ENST00000469858 ALDH16A1Q8IZ83 802 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 GHDCQ8N2G8 530 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 NANOGP1Q8N7R0 232 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 LRRC75AQ8NAA5 344 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 ATP6V1C2Q8NEY4 427 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 OR51G2Q8NGK0 314 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 OR9Q1Q8NGQ5 310 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 NKD1Q969G9 470 aa16.41■□□□□ 0.22
SMC4-211ENST00000469858 CHCHD3Q9NX63 227 aaKnown RBP16.41■□□□□ 0.22
SMC4-211ENST00000469858 LSM2Q9Y333 95 aaKnown RBP16.41■□□□□ 0.22
SMC4-211ENST00000469858 TEX13CA0A0J9YWL9 993 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 G3V3Y1 287 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 CD14P08571 375 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 PEX19P40855 299 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 SPHARQ15513 63 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 CTF1Q16619 201 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 SLC22A10Q63ZE4 541 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms