RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 GPAT4Q86UL3 456 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 ZNF440Q8IYI8 595 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 LRRC75A-AS1Q8N1F1 130 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 CLIP4Q8N3C7 705 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 ZNF433Q8N7K0 673 aaPredicted RBP7.65□□□□□ -1.18
RFX3-209ENST00000451859 ZNF611Q8N823 705 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 HSD17B8Q92506 261 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 GTF2H4Q92759 462 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 FBXW5Q969U6 566 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 SPDL1Q96EA4 605 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 C7orf26Q96N11 449 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 TMEM204Q9BSN7 226 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 NAA11Q9BSU3 229 aaPredicted RBP7.65□□□□□ -1.18
RFX3-209ENST00000451859 C1QTNF6Q9BXI9 259 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 ABCA2Q9BZC7 2435 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 CXorf56Q9H5V9 222 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 SLC25A37Q9NYZ2 338 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 NPAP1Q9NZP6 1156 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 DSPPQ9NZW4 1301 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 UPB1Q9UBR1 384 aa7.65□□□□□ -1.18
RFX3-209ENST00000451859 A0A096LPI6 279 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 A0A0G2JPF8 293 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 HNRNPCL2B2RXH8 293 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 HNRNPCL3B7ZW38 293 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 M0R1B8 84 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 GPR171O14626 319 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 ABCD4O14678 606 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 ZNF208O43345 1280 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 EIF1BO60739 113 aaKnown RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 HNRNPCL1O60812 293 aaKnown RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 GPIP06744 558 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SOD3P08294 240 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 HNRNPCL4P0DMR1 293 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 BMP4P12644 408 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 AQP1P29972 269 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 ACAA2P42765 397 aaKnown RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 CLK1P49759 484 aaKnown RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 CDH11P55287 796 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 RPS4XP62701 263 aaKnown RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 LTBQ06643 244 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SPOCK1Q08629 439 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 PDK3Q15120 406 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 PAGE3Q5JUK9 113 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 TIMM23BQ5SRD1 257 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 GCNT6Q5T4J0 391 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 RNF220Q5VTB9 566 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 AP1ARQ63HQ0 302 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SEZ6L2Q6UXD5 910 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 BIVMQ86UB2 503 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 FUNDC1Q8IVP5 155 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 C10orf111Q8N326 155 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 TMEM99Q8N816 258 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 LILRB1Q8NHL6 650 aaPredicted RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 NFKBIDQ8NI38 313 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SMAP2Q8WU79 429 aaPredicted RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 PMM1Q92871 262 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SLC25A36Q96CQ1 311 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 POM121Q96HA1 1249 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SPATA9Q9BWV2 254 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 TAPBPLQ9BX59 468 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 GSX2Q9BZM3 304 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 ADAM19Q9H013 955 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 RAD21L1Q9H4I0 556 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SLC7A10Q9NS82 523 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 INTS9Q9NV88 658 aaKnown RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 ASB6Q9NWX5 421 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SLAMF8Q9P0V8 285 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 POU2F3Q9UKI9 436 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 TRAPPC4Q9Y296 219 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 SLC9A8Q9Y2E8 581 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 CHST2Q9Y4C5 530 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 MAGED1Q9Y5V3 778 aaPredicted RBP7.64□□□□□ -1.19
RFX3-209ENST00000451859 FLVCR1Q9Y5Y0 555 aa7.64□□□□□ -1.19
RFX3-209ENST00000451859 FN1P02751 2386 aaKnown RBP7.63□□□□□ -1.19
RFX3-209ENST00000451859 ABCA1O95477 2261 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 LIPT2A6NK58 231 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 OR5H1A6NKK0 313 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 FAAHO00519 579 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 DNPH1O43598 174 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 PGM3O95394 542 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 AHSA1O95433 338 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 TGDSO95455 350 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 CNOT4O95628 575 aaKnown RBP7.63□□□□□ -1.19
RFX3-209ENST00000451859 LY6G6DO95868 133 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 ITGA5P08648 1049 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 ARAFP10398 606 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 HOXB9P17482 250 aaPredicted RBP7.63□□□□□ -1.19
RFX3-209ENST00000451859 CBLP22681 906 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 FKBP2P26885 142 aaKnown RBP7.63□□□□□ -1.19
RFX3-209ENST00000451859 SLC16A1P53985 500 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 H3F3AP84243 136 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 LGALS3BPQ08380 585 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 SF3A3Q12874 501 aaKnown RBP eCLIP7.63□□□□□ -1.19
RFX3-209ENST00000451859 FADDQ13158 208 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 VEZF1Q14119 521 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 SQLEQ14534 574 aa7.63□□□□□ -1.19
RFX3-209ENST00000451859 ZNF672Q499Z4 452 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms