RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ABCD3P28288 659 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 HOXA6P31267 233 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 GDNFP39905 211 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 GAS1P54826 345 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR10A3P58181 314 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ACY1Q03154 408 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 CDNFQ49AH0 187 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 SFXN4Q6P4A7 337 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 PODNL1Q6PEZ8 512 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 LILRA3Q8N6C8 439 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 EDEM2Q9BV94 578 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 XKR8Q9H6D3 395 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 OPA3Q9H6K4 179 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 CTPS2Q9NRF8 586 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 INPP5EQ9NRR6 644 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 RCE1Q9Y256 329 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 A0A1W2PPE3 182 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ANXA7P20073 488 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 CCR8P51685 355 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 AP3S2P59780 193 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 HSPB3Q12988 150 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 TSPAN31Q12999 210 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ERV3-1Q14264 604 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ARHGAP19Q14CB8 494 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 HNRNPA1L2Q32P51 320 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 FAM69AQ5T7M9 428 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR1S2Q8NGQ3 325 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 SFXN5Q8TD22 340 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 DPEP2Q9H4A9 486 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 SLC9B1P1A6NJY1 282 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 NFATC1O95644 943 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 RNF144AP50876 292 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 KHDRBS2Q5VWX1 349 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 C1orf94Q6P1W5 598 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 CCDC116Q8IYX3 515 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 HORMAD2Q8N7B1 307 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR5M1Q8NGP8 315 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 SNX33Q8WV41 574 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZCCHC3Q9NUD5 404 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 FAM86C2PA6NEL3 165 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 UBXN7O94888 489 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ETHE1O95571 254 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 MGMTP16455 207 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 HTR2AP28223 471 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 SHC1P29353 583 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 DLX5P56178 289 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ACSM1Q08AH1 577 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 PRRC2BQ5JSZ5 2229 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF626Q68DY1 528 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 TMPRSS5Q9H3S3 457 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 AUNIPQ9H7T9 357 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 CXorf36Q9H7Y0 433 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ASF1AQ9Y294 204 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 ANTXRLA6NF34 631 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 EPHX1P07099 455 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF35P13682 527 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 MAPK3P27361 379 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 SLC1A3P43003 542 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 CCR9P51686 369 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 STARD6P59095 220 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 GPM6BQ13491 265 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 SF1Q15637 639 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 POM121L1PQ3SYA9 428 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 C9orf50Q5SZB4 431 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 ACOT11Q8WXI4 607 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 RNF122Q9H9V4 155 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 BCL2L10Q9HD36 194 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 HRASLSQ9HDD0 168 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 DZANK1Q9NVP4 752 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 YBX2Q9Y2T7 364 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 CARHSP1Q9Y2V2 147 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 KRT33AO76009 404 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 COX5BP10606 129 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 NQO2P16083 231 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 BMP7P18075 431 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 BDKRB2P30411 391 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 H2BFSP57053 126 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 MC1RQ01726 317 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 CCSMST1Q4G0I0 132 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 KIAA1161Q6NSJ0 714 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 RPL13AP3Q6NVV1 102 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 TMEM71Q6P5X7 295 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF765Q7L2R6 523 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 C15orf40Q8WUR7 153 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 FGF13Q92913 245 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 SMARCD2Q92925 531 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 ASF1BQ9NVP2 202 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 OBP2AQ9NY56 170 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 DOCK8Q8NF50 2099 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 K7ESM1 405 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 SAP18O00422 153 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 REM1O75628 298 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 SC5DO75845 299 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 NPPBP16860 134 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 GPR1P46091 355 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 HCCSP53701 268 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 CDK5Q00535 292 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 MLC1Q15049 377 aa12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF791Q3KP31 576 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-204ENST00000449372 EOGTQ5NDL2 527 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms